RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TGM4P49221 684 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 MCM2P49736 904 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CDKN1CP49918 316 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 KPNA1P52294 538 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 LIM2P55344 173 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CLDN8P56748 225 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 KIAA1024LP59773 190 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RPL32P62910 135 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CSNK1G2P78368 415 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SLC35B1P78383 322 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CX3CL1P78423 397 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 GCNT1Q02742 428 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 GLO1Q04760 184 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 STX5Q13190 355 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ATP1A4Q13733 1029 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CLCA4Q14CN2 919 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 BRD3Q15059 726 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ANGPT1Q15389 498 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 MAPK11Q15759 364 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 LINC01554Q52M75 96 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ACTBL2Q562R1 376 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM133BQ5BKY9 247 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CLEC12AQ5QGZ9 265 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ATAD3BQ5T9A4 648 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CLEC6AQ6EIG7 209 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 DGAT2L7PQ6IED9 249 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 JMJD6Q6NYC1 403 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 METTL2BQ6P1Q9 378 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 DARS2Q6PI48 645 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CERS6Q6ZMG9 384 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 BEND5Q7L4P6 421 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SSBP3-AS1Q7Z2R9 100 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 MOB3BQ86TA1 216 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM219AQ8IW50 185 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 HOMEZQ8IX15 550 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 APCDD1Q8J025 514 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SPATA6LQ8N4H0 392 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 FAM89BQ8N5H3 189 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RNF148Q8N7C7 305 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ST6GALNAC3Q8NDV1 305 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ST13P5Q8NFI4 369 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR5AU1Q8NGC0 362 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR52I1Q8NGK6 324 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 OR8K3Q8NH51 312 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SFXN5Q8TD22 340 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CD300LFQ8TDQ1 290 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 NELFBQ8WX92 580 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CRYGNQ8WXF5 182 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RAPGEF4Q8WZA2 1011 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 TM4SF18Q96CE8 201 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 C16orf58Q96GQ5 468 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RBM17Q96I25 401 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 METTL2AQ96IZ6 378 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SERPINB11Q96P15 392 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 GPR82Q96P67 336 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 ZNF559Q9BR84 538 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RIOK2Q9BVS4 552 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 TSSK6Q9BXA6 273 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 MAGEB5Q9BZ81 275 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RANBP17Q9H2T7 1088 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SYNDIG1Q9H7V2 258 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 GPN2Q9H9Y4 310 aaPredicted RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SIAEQ9HAT2 523 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 PLGRKTQ9HBL7 147 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 NRBP2Q9NSY0 501 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SMC4Q9NTJ3 1288 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 AIG1Q9NVV5 245 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 TERF2IPQ9NYB0 399 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 TAS2R9Q9NYW1 312 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 CISD1Q9NZ45 108 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RAI14Q9P0K7 980 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RBM12B-AS1Q9P1G2 102 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 RSL24D1Q9UHA3 163 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 SH3BGRL2Q9UJC5 107 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 OSGIN2Q9Y236 505 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 GDAQ9Y2T3 454 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA9Q9Y5G4 932 aaKnown RBP-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA8Q9Y5G5 932 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA6Q9Y5G7 932 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 PCDHGA3Q9Y5H0 932 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 NPTNQ9Y639 398 aa-2.15□□□□□ -2.75
RNU4-88P-201ENST00000411220 A0A087WUU8 490 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRAV8-3A0A0A6YYJ7 113 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 A0A0J9YYE9 177 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 TRBC2A0A5B9 178 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAM170AA1A519 330 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 GTPBP10A4D1E9 387 aaKnown RBP-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 PRSS37A4D1T9 235 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 E9PI62 339 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 KLRC4-KLRK1H3BQV0 150 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 HS3ST1O14792 307 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAGEB3O15480 346 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 MPZL2O60487 215 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 KLHL41O60662 606 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 SNX2O60749 519 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 ALOX12BO75342 701 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 RFPL1O75677 317 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 GCNT3O95395 438 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 CER1O95813 267 aa-2.16□□□□□ -2.76
RNU4-88P-201ENST00000411220 PAHP00439 452 aa-2.16□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms