RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CLDN18P56856 261 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ARG2P78540 354 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FABP5Q01469 135 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 GLO1Q04760 184 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FMODQ06828 376 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SCRN3Q0VDG4 424 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TRAM1Q15629 374 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ETFDHQ16134 617 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 HBMQ6B0K9 141 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLC25A47Q6Q0C1 308 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 RHOUQ7L0Q8 258 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FAM109AQ8N4B1 249 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZFP41Q8N8Y5 198 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR9K2Q8NGE7 335 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM54Q969K7 222 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MARVELD3Q96A59 401 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 UCN2Q96RP3 112 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZDHHC11Q9H8X9 412 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SSR3Q9UNL2 185 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 A3GALT2U3KPV4 340 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FAM186AA6NE01 2351 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MED12Q93074 2177 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 GVINP1Q7Z2Y8 2422 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 LOC100506127A0A0U1RQW1 187 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TVP23AA6NH52 213 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 J3QLW9 94 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 EIF1AYO14602 144 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 LRRTM2O43300 516 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CLPXO76031 633 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 AQP8O94778 261 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 GPANK1O95872 356 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 INHBBP09529 407 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF19P17023 458 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CELP19835 753 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ENTPD1P49961 510 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CCL11P51671 97 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 POLR2GP62487 172 aaKnown RBP eCLIP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FOXC1Q12948 553 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CDK5R1Q15078 307 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 KCNMB1Q16558 191 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 DEFB109BQ30KR1 87 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TP53I3Q53FA7 332 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 IGFL3Q6UXB1 125 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FOXL2NBQ6ZUU3 175 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLC22A16Q86VW1 577 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM123Q8N131 208 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZIC4Q8N9L1 334 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR6N2Q8NGY6 317 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR10D3Q8NH80 312 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TRIM63Q969Q1 353 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CPNE4Q96A23 557 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SMIM19Q96E16 107 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR2M2Q96R28 347 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MED18Q9BUE0 208 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 EMC6Q9BV81 110 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MRM2Q9UI43 246 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 FOXD3Q9UJU5 478 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 COA3Q9Y2R0 106 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 METTL15A6NJ78 407 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 FAM166BA8MTA8 275 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 DLL1O00548 723 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 CYTIPO60759 359 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 UPK3AO75631 287 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ACTL6AO96019 429 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 HLA-DPB1P04440 258 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 NR2C1P13056 603 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 RFC3P40938 356 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 STARP49675 285 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 GBX2P52951 348 aaPredicted RBP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 CARD18P57730 90 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 CLRN1P58418 232 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 PLGLB1Q02325 96 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ROM1Q03395 351 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 DGUOKQ16854 277 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 C10orf128Q5T292 105 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 PDSS1Q5T2R2 415 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM91Q6ZNR0 172 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 PLEKHG7Q6ZR37 379 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 DPY19L4Q7Z388 723 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 GPAT4Q86UL3 456 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF454Q8N9F8 522 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 SYT14Q8NB59 555 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 SNX33Q8WV41 574 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ASB17Q8WXJ9 295 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 DCLRE1CQ96SD1 692 aaKnown RBP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 SCNM1Q9BWG6 230 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 SLC6A15Q9H2J7 730 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ACOXLQ9NUZ1 547 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 DKK4Q9UBT3 224 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 KCNG2Q9UJ96 466 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 RCE1Q9Y256 329 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 MSRB2Q9Y3D2 182 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 CSAG2Q9Y5P2 127 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 FLVCR1Q9Y5Y0 555 aa4.9□□□□□ -1.62
EPHA4-202ENST00000409854 ZFHX2Q9C0A1 2572 aaPredicted RBP4.9□□□□□ -1.62
EPHA4-202ENST00000409854 TRAV6A0A075B6T7 132 aa4.9□□□□□ -1.63
EPHA4-202ENST00000409854 IGKV3D-15A0A087WSY6 115 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms