RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 DNAJC15Q9Y5T4 150 aa5.34□□□□□ -1.55
LSM5-203ENST00000409782 V9GYY5 206 aaPredicted RBP5.34□□□□□ -1.55
LSM5-203ENST00000409782 CCDC168Q8NDH2 2452 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 DNAJC9-AS1A6NH13 148 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TMEM114B3SHH9 223 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 NPIPA2E9PIF3 369 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SOCS2O14508 198 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TM9SF1O15321 606 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 RGS16O15492 202 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 UGT2B11O75310 529 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SPAG7O75391 227 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 CLN5O75503 358 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 LRATO95237 230 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 DIRAS3O95661 229 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TOMM40O96008 361 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 OPN1MWP04001 364 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SERPINE1P05121 402 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 HPNP05981 417 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 BPGMP07738 259 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SFTPBP07988 381 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 FGF4P08620 206 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 OPN1MW2P0DN77 364 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 OPN1MW3P0DN78 364 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 COX6B1P14854 86 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 GABRA1P14867 456 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 GDF1P27539 372 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 PTPN6P29350 595 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 IL12BP29460 328 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 GCKP35557 465 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 HPCAL1P37235 193 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 NKX2-1P43699 371 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 RPL38P63173 70 aaKnown RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 RPL24P83731 157 aaKnown RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 C2orf80Q0P641 193 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TRAP1Q12931 704 aaKnown RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 ARMCX4Q5H9R4 360 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 C1orf185Q5T7R7 199 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TIGD3Q6B0B8 471 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TMEM107Q6UX40 140 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 NPSR1Q6W5P4 371 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 C3P1Q6ZMU1 363 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 NCCRP1Q6ZVX7 275 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 STHQ8IWL8 128 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 MARVELD2Q8N4S9 558 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 ACBD4Q8NC06 268 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 OR7G2Q8NG99 324 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 OR2T11Q8NH01 316 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 RNF138Q8WVD3 245 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 HSD17B8Q92506 261 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TMBIM1Q969X1 311 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 PPCDCQ96CD2 204 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 ZBED6CLQ96FA7 236 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 JSRP1Q96MG2 331 aaPredicted RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 AMDHD1Q96NU7 426 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 ZIM3Q96PE6 472 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SSX3Q99909 188 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 PARD6BQ9BYG5 372 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 TUBB1Q9H4B7 451 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 RIBC2Q9H4K1 309 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 REEP4Q9H6H4 257 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 EXO5Q9H790 373 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 COQ10BQ9H8M1 238 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 FOLH1BQ9HBA9 442 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 ACOXLQ9NUZ1 547 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 KLRF1Q9NZS2 232 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SPRR3Q9UBC9 169 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 SLC7A7Q9UM01 511 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 STUB1Q9UNE7 303 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 ABCG2Q9UNQ0 655 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 FAM215AQ9Y5M1 114 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 WIF1Q9Y5W5 379 aa5.33□□□□□ -1.56
LSM5-203ENST00000409782 PHF3Q92576 2039 aaKnown RBP5.33□□□□□ -1.56
LSM5-203ENST00000409782 CACNA1DQ01668 2161 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 INTS1Q8N201 2190 aaKnown RBP5.32□□□□□ -1.56
LSM5-203ENST00000409782 CELSR2Q9HCU4 2923 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 NINQ8N4C6 2090 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 C15orf38-AP3S2A0A0A6YYH1 394 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 UPK1AO00322 258 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 BIRC5O15392 142 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 SYNGR3O43761 229 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 TSPAN2O60636 221 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 REM1O75628 298 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 KRT33AO76009 404 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 AK1P00568 194 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 LINC00032P0C843 101 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 CT45A8P0DMV1 189 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 CT45A9P0DMV2 189 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 PSG1P11464 419 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 BCKDHAP12694 445 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 SFTPDP35247 375 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 PTGDSP41222 190 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 PSMD4P55036 377 aaKnown RBP5.32□□□□□ -1.56
LSM5-203ENST00000409782 NUP107P57740 925 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 LRRC74AQ0VAA2 488 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■□□□□ 10.3
LSM5-203ENST00000409782 ZNHIT3Q15649 155 aaPredicted RBP5.32□□□□□ -1.56
LSM5-203ENST00000409782 SLC25A35Q3KQZ1 300 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 VPS26BQ4G0F5 336 aa5.32□□□□□ -1.56
LSM5-203ENST00000409782 ACSF3Q4G176 576 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms