RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SFRP4Q6FHJ7 346 aaPredicted RBP10.24□□□□□ -0.77
SNX13-202ENST00000409604 SLC22A25Q6T423 547 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 TNFAIP8L1Q8WVP5 186 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 NOX4Q9NPH5 578 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 PHF3Q92576 2039 aaKnown RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 M0R1B8 84 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 SURF4O15260 269 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZNF354AO60765 605 aaPredicted RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZNF44P15621 663 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 SKP2Q13309 424 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 PAMR1Q6UXH9 720 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 RNF165Q6ZSG1 346 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 USP51Q70EK9 711 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 MS4A15Q8N5U1 240 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 SLC30A2Q9BRI3 323 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 PRR14LQ5THK1 2151 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 GABRPO00591 440 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZIC2O95409 532 aaPredicted RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 RECKO95980 971 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 RBM34P42696 430 aaKnown RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 PITPNBP48739 271 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 MLF1P58340 268 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 MGAT2Q10469 447 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZNF141Q15928 474 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 FAHD1Q6P587 224 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 OR2M7Q8NG81 312 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 OR2AE1Q8NHA4 323 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 S100ZQ8WXG8 99 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 SLAMF6Q96DU3 332 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 TXNIPQ9H3M7 391 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 WDR54Q9H977 334 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 DHHO43323 396 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 TIMM8AO60220 97 aaPredicted RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 UMODP07911 640 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 SP1P08047 785 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZNF83P51522 516 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 PEG10Q86TG7 708 aaKnown RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 TOMM5Q8N4H5 51 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 TMEM251Q8N6I4 163 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZPLD1Q8TCW7 415 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 BORCS5Q969J3 196 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 OXGR1Q96P68 337 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 ZNF385AQ96PM9 386 aaKnown RBP10.23□□□□□ -0.77
SNX13-202ENST00000409604 SLC6A7Q99884 636 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 OR10A2Q9H208 303 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 FBXL3Q9UKT7 428 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 B9D1Q9UPM9 204 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 VPS13AQ96RL7 3174 aa10.23□□□□□ -0.77
SNX13-202ENST00000409604 A0A0J9YW62 118 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ZNF814B7Z6K7 855 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 FTCDNL1E5RQL4 147 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 OR7C1O76099 320 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 OR2T7P0C7T2 308 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 FRKP42685 505 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 MTCP1P56278 107 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ARF1P84077 181 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 PDCD1Q15116 288 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CD163Q86VB7 1156 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CXorf67Q86X51 503 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 OR2T27Q8NH04 317 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 M1APQ8TC57 530 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 IL1F10Q8WWZ1 152 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 SLCO1C1Q9NYB5 712 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ABCA1O95477 2261 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CDK4P11802 303 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 CNR1P21554 472 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 SDHBP21912 280 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 GABRA2P47869 451 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 SLC36A2Q495M3 483 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 SLC46A3Q7Z3Q1 461 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 FJX1Q86VR8 437 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 LRRC46Q96FV0 321 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 RTN4RQ9BZR6 473 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ANKRD19PQ9H560 264 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 HEATR1Q9H583 2144 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 HPGDSO60760 199 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ANKRD34CP0C6C1 535 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 FCGR2AP12318 317 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 GRK5P34947 590 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 GPR50Q13585 617 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 LY6DQ14210 128 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 COL19A1Q14993 1142 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ZNF528Q3MIS6 628 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 C8orf82Q6P1X6 216 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 FTMTQ8N4E7 242 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 ASCC1Q8N9N2 400 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 DVL3Q92997 716 aaPredicted RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 ST6GALNAC5Q9BVH7 336 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 PROCRQ9UNN8 238 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 DOCK10Q96BY6 2186 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.22□□□□□ -0.77
SNX13-202ENST00000409604 WBP4O75554 376 aaKnown RBP10.22□□□□□ -0.77
SNX13-202ENST00000409604 MTRF1O75570 445 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms