RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ARHGAP11BQ3KRB8 267 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 PLA1AQ53H76 456 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 EEF1A1P5Q5VTE0 462 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 ABI3BPQ7Z7G0 1075 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 LINC00518Q8N0U6 118 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 EDEM2Q9BV94 578 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 ANKRD61A6NGH8 418 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 CYB5BO43169 146 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 DUSP5Q16690 384 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM182Q6ZP80 229 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 BAGE3Q86Y29 109 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 BAGE2Q86Y30 109 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 RSC1A1Q92681 617 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 SGPP1Q9BX95 441 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 PPP1R3EQ9H7J1 279 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 CRLF2Q9HC73 371 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 CLDND1Q9NY35 253 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 EXOGQ9Y2C4 368 aaKnown RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 ARID1AO14497 2285 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 DDX60LQ5H9U9 1706 aaKnown RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 CCDC163A0A0D9SF12 145 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 POM121BA6NF01 834 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 E5RGE8 158 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 P2RY10O00398 339 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 CTDSPLO15194 276 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 UBXN2BQ14CS0 331 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 GKN2Q86XP6 184 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 OR5L2Q8NGL0 311 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 INSM2Q96T92 566 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 C8orf33Q9H7E9 229 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 NTNG1Q9Y2I2 539 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 NSG2Q9Y328 171 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 GSTZ1O43708 216 aaPredicted RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 TMPRSS11DO60235 418 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 APEHP13798 732 aaKnown RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 RAB4AP20338 218 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 ANKRD16Q6P6B7 361 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 EMG1Q92979 244 aaKnown RBP16.18■□□□□ 0.18
SMPD4-202ENST00000409031 SLC35A4Q96G79 324 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 LINC00597Q9H2U6 94 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 RAC2P15153 192 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 INSL4Q14641 139 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 NSDHLQ15738 373 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 C5orf46Q6UWT4 87 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 NHLRC1Q6VVB1 395 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 AK3Q9UIJ7 227 aa16.18■□□□□ 0.18
SMPD4-202ENST00000409031 SNCAP37840 140 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 DSC1Q08554 894 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 CLEC1AQ8NC01 280 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 ADAM19Q9H013 955 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 CHRDQ9H2X0 955 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 ZFP92A6NM28 416 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 ALOX5APP20292 161 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 OGFOD3Q6PK18 319 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 OR14A16Q8NHC5 309 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 SEH1LQ96EE3 360 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 INSL6Q9Y581 213 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 BLACEA4D250 179 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 BRINP1O60477 761 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 FCMRO60667 390 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 LRP3O75074 770 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 GLIPR1L1Q6UWM5 242 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 MCATQ8IVS2 390 aaKnown RBP16.17■□□□□ 0.18
SMPD4-202ENST00000409031 FBLIM1Q8WUP2 373 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 PLEK2Q9NYT0 353 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM202A6NGA9 273 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 DDAH2O95865 285 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 FBLP22087 321 aaKnown RBP16.17■□□□□ 0.18
SMPD4-202ENST00000409031 PSMB3P49720 205 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 ZNF485Q8NCK3 441 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 OR5AP2Q8NGF4 316 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 CCNL2Q96S94 520 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-202ENST00000409031 RBM24Q9BX46 236 aaKnown RBP16.17■□□□□ 0.18
SMPD4-202ENST00000409031 UQCC1Q9NVA1 299 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 NTMQ9P121 344 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 FOXJ3Q9UPW0 622 aa16.17■□□□□ 0.18
SMPD4-202ENST00000409031 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.17■□□□□ 0.18
SMPD4-202ENST00000409031 A0A0A6YYC8 382 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 A0A0J9YY10 115 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 SERTM1A2A2V5 107 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 I3L1I5 382 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 PHF1O43189 567 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 HPXP02790 462 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 DHPSP49366 369 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 POU3F1Q03052 451 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 OR52W1Q6IF63 320 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 EXD3Q8N9H8 876 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 OPN4Q9UHM6 478 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 CEBPZOSA8MTT3 80 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 CD63P08962 238 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 DUSP1P28562 367 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 COL9A2Q14055 689 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 TOMM34Q15785 309 aaPredicted RBP16.16■□□□□ 0.18
SMPD4-202ENST00000409031 GUK1Q16774 197 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 DEFB110Q30KQ9 67 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 TAS2R4Q9NYW5 299 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 POMT1Q9Y6A1 747 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 DOCK2Q92608 1830 aa16.16■□□□□ 0.18
SMPD4-202ENST00000409031 TRAV36DV7A0A075B6V5 113 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms