RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 PRG3Q9Y2Y8 225 aaPredicted RBP20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 LOC100289279A0A1B0GTE1 492 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 DUXAA6NLW8 204 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 H7C1Q1 480 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 DOK2O60496 412 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 DAOP14920 347 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 POLR2LP62875 67 aaKnown RBP20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 ACTBL2Q562R1 376 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 C9orf64Q5T6V5 341 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 PRSS54Q6PEW0 395 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 PAPD4Q6PIY7 484 aaKnown RBP20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 FBXO46Q6PJ61 603 aaPredicted RBP20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 C17orf64Q86WR6 236 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 ZNF511Q8NB15 262 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 BEND2Q8NDZ0 799 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC6A7Q99884 636 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 EPHX3Q9H6B9 360 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 DNAJB11Q9UBS4 358 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC23A2Q9UGH3 650 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 CHRNA9Q9UGM1 479 aa20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 MRPS33Q9Y291 106 aaKnown RBP20.24■□□□□ 0.83
CUEDC1-202ENST00000407144 TRAV8-7A0A075B6U6 113 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 CXorf51AA0A1B0GTR3 108 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 C5orf51A6NDU8 294 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 H0YIZ8 118 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 AGPAT2O15120 278 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 MAS1P04201 325 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 ARG1P05089 322 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 PBLDP30039 288 aaPredicted RBP20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC7A9P82251 487 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 CLINT1Q14677 625 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 SCGB2B2Q4G0G5 96 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 HIST2H3PS2Q5TEC6 136 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 ARHGAP40Q5TG30 622 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 CCDC116Q8IYX3 515 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 AMER3Q8N944 861 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC5A7Q9GZV3 580 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 HDGFL3Q9Y3E1 203 aa20.23■□□□□ 0.83
CUEDC1-202ENST00000407144 AGR2O95994 175 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 HCKP08631 526 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ST6GAL1P15907 406 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 SOX2P48431 317 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 UCP2P55851 309 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 BEX3Q00994 111 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 DUSP8Q13202 625 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 Q6ZVL8 140 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ZNF595Q8IYB9 648 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ACBD4Q8NC06 268 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 GLYATL1Q969I3 302 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 MSRAQ9UJ68 235 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ZDHHC8Q9ULC8 765 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 WASF3Q9UPY6 502 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 A0A1W2PPE2 198 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 TBC1D3BA6NDS4 549 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 OR1F1O43749 312 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ERAL1O75616 437 aaKnown RBP20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 GLCEO94923 617 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 TBC1D3HP0C7X1 549 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 SERPINF1P36955 418 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 ARRB1P49407 418 aaPredicted RBP20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 REEP5Q00765 189 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 C2orf76Q3KRA6 126 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 TBC1D3GQ6DHY5 549 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 GLB1LQ6UWU2 654 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC39A5Q6ZMH5 540 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 CD163Q86VB7 1156 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 TRAPPC5Q8IUR0 188 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 CDS1Q92903 461 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 CNRIP1Q96F85 164 aaPredicted RBP20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 SLC35A4Q96G79 324 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 NOL4LQ96MY1 436 aaPredicted RBP20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 TAF9BQ9HBM6 251 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 SPACA1Q9HBV2 294 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 MARCH5Q9NX47 278 aa20.22■□□□□ 0.83
CUEDC1-202ENST00000407144 DCTN6O00399 190 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 PRICKLE3O43900 615 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 PMP2P02689 132 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 SERPINA5P05154 406 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 PTGER1P34995 402 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 RAP1AP62834 184 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 FAM46CQ5VWP2 391 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 ADAMTS15Q8TE58 950 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 FAM3DQ96BQ1 224 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 MOGAT1Q96PD6 335 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 TGM7Q96PF1 710 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 TNFRSF13CQ96RJ3 184 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 CDCA3Q99618 268 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 MSGN1A6NI15 193 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 OR8U9P0C7N5 309 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 HIST1H1CP16403 213 aaKnown RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 CSNK2A2P19784 350 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 RPS10P46783 165 aaKnown RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 RAB11BQ15907 218 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 LRRC73Q5JTD7 316 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 RSPO2Q6UXX9 243 aaPredicted RBP20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 NPSR1Q6W5P4 371 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 KCTD9Q7L273 389 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 HIST3H2BBQ8N257 126 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 ZNF610Q8N9Z0 462 aa20.21■□□□□ 0.83
CUEDC1-202ENST00000407144 OR51L1Q8NGJ5 315 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms