RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 DCXRQ7Z4W1 244 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 THRSPQ92748 146 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 SLC25A44Q96H78 314 aaPredicted RBP22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 GFI1Q99684 422 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 ANKRD10Q9NXR5 420 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 CLEC4AQ9UMR7 237 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 LRP12Q9Y561 859 aa22.02■■□□□ 1.12
DNMT3A-206ENST00000406659 TRBV5-7A0A0A0MS05 114 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 A0A1B0GVC2 190 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 A6NIN4 97 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 IFITM5A6NNB3 132 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 ZNF814B7Z6K7 855 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 TRAF3IP2O43734 574 aaPredicted RBP22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 PCK2Q16822 640 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 ACER2Q5QJU3 275 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 HES5Q5TA89 166 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 DHRS13Q6UX07 377 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 NOXO1Q8NFA2 376 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 IL17RDQ8NFM7 739 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 OR10AC1Q8NH08 325 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 HDHD2Q9H0R4 259 aa22.02■■□□□ 1.11
DNMT3A-206ENST00000406659 OR2M5A3KFT3 312 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 AIPO00170 330 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 TMEM127O75204 238 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 DLSTP36957 453 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 PYHIN1Q6K0P9 492 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 MZT2BQ6NZ67 158 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 RAB43Q86YS6 212 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 LINC00346Q8IVM7 164 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 OR6X1Q8NH79 312 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 TSEN15Q8WW01 171 aaKnown RBP22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 ADAMTS14Q8WXS8 1223 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 WACQ9BTA9 647 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 GPR87Q9BY21 358 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 SLC22A13Q9Y226 551 aa22.01■■□□□ 1.11
DNMT3A-206ENST00000406659 LOC102725191A0A1B0GVB3 256 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 ZNF726A6NNF4 738 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 PNPP00491 289 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 PGA4P0DJD7 388 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 PGA3P0DJD8 388 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 PRKAR1AP10644 381 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 TOMM20Q15388 145 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 CARTPTQ16568 116 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 LGALS14Q8TCE9 139 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 C11orf40Q8WZ69 217 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 HPS1Q92902 700 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 TMEM106AQ96A25 262 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 PCDHGA1Q9Y5H4 931 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 CACNA1CQ13936 2221 aa22■■□□□ 1.11
DNMT3A-206ENST00000406659 C21orf140B9A014 251 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 H3BSH0 61 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 WNT11O96014 354 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 ZNF17P17021 662 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 LAP3P28838 519 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 MAP2K3P46734 347 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 CD97P48960 835 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 DNASE1L1P49184 302 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 SPEM2Q0P670 501 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 UBE2NLQ5JXB2 153 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 CARD17Q5XLA6 110 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 CATSPERDQ86XM0 798 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 UBE2J2Q8N2K1 259 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 OR51A4Q8NGJ6 313 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 ENKURQ8TC29 256 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 CMTM3Q96MX0 182 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 PIGQQ9BRB3 760 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 SDK2Q58EX2 2172 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 A0A1W2PPL8 197 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 RAMP1O60894 148 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 MFGE8Q08431 387 aaPredicted RBP21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 HES3Q5TGS1 186 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 ZNF57Q68EA5 555 aaPredicted RBP21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 LRRTM1Q86UE6 522 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 ST7LQ8TDW4 575 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 R4GMQ9 66 aa21.99■■□□□ 1.11
DNMT3A-206ENST00000406659 ARPC4-TTLL3A0A0A6YYG9 625 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 TLX3O43711 291 aaPredicted RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 EIF1BO60739 113 aaKnown RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 SLC43A1O75387 559 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 KLK2P20151 261 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 GPR85P60893 370 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 PITPNAQ00169 270 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 CD300CQ08708 224 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 DEGS2Q6QHC5 323 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 BAIAP2L2Q6UXY1 529 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 RFT1Q96AA3 541 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 NAA11Q9BSU3 229 aaPredicted RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 THAP7Q9BT49 309 aaPredicted RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 MRI1Q9BV20 369 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 CENPMQ9NSP4 180 aa21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 PCDHGA9Q9Y5G4 932 aaKnown RBP21.98■■□□□ 1.11
DNMT3A-206ENST00000406659 ANXA2P2A6NMY6 339 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 ANXA2P07355 339 aaKnown RBP21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 H2BFMP0C1H6 154 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 NR4A2P43354 598 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 CORO6Q6QEF8 472 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 BEST3Q8N1M1 668 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 PPP1R14AQ96A00 147 aa21.97■■□□□ 1.11
DNMT3A-206ENST00000406659 THOC3Q96J01 351 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms