RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 FAM118AQ9NWS6 357 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 NPAP1Q9NZP6 1156 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 NDRG4Q9ULP0 352 aaKnown RBP25.61■■□□□ 1.69
USP42-202ENST00000404008 HRNRQ86YZ3 2850 aaPredicted RBP25.6■■□□□ 1.69
USP42-202ENST00000404008 CASKO14936 926 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 UBL3O95164 117 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 MPZL1O95297 269 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 KCNMB1Q16558 191 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 UGT2A3Q6UWM9 527 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 CXXC5Q7LFL8 322 aaKnown RBP25.6■■□□□ 1.69
USP42-202ENST00000404008 SLC16A14Q7RTX9 510 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 TCEANCQ8N8B7 351 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 SLC26A10Q8NG04 563 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 OR51L1Q8NGJ5 315 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 FGFBP3Q8TAT2 258 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 PITX2Q99697 317 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 VCXQ9H320 206 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 HECTD1Q9ULT8 2610 aa25.6■■□□□ 1.69
USP42-202ENST00000404008 CD79AP11912 226 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 PAX7P23759 505 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 CDC42P60953 191 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 HSF2Q03933 536 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 DAZAP2Q15038 168 aaPredicted RBP25.59■■□□□ 1.69
USP42-202ENST00000404008 TMEM163Q8TC26 289 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 C11orf40Q8WZ69 217 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 NOX3Q9HBY0 568 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 EMC7Q9NPA0 242 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 NGBQ9NPG2 151 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 CENPEQ02224 2701 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 PKDREJQ9NTG1 2253 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 NBPF19A0A087WUL8 3843 aa25.59■■□□□ 1.69
USP42-202ENST00000404008 LOC100130705A0A1B0GUX0 176 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 SLC16A6O15403 523 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 TLX2O43763 284 aaPredicted RBP25.58■■□□□ 1.69
USP42-202ENST00000404008 CST2P09228 141 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 PATE4P0C8F1 98 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 PIGFQ07326 219 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 ENDOGQ14249 297 aaKnown RBP25.58■■□□□ 1.69
USP42-202ENST00000404008 GSG1Q2KHT4 349 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 SLC36A2Q495M3 483 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 HIST2H2BCQ6DN03 193 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 DPPA2Q7Z7J5 298 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 MDP1Q86V88 176 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 BBS1Q8NFJ9 593 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 FAM81AQ8TBF8 368 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 FBXO17Q96EF6 278 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 ZNF416Q9BWM5 594 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 C1QTNF6Q9BXI9 259 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 MOV10Q9HCE1 1003 aaKnown RBP25.58■■□□□ 1.69
USP42-202ENST00000404008 CRNNQ9UBG3 495 aaPredicted RBP25.58■■□□□ 1.69
USP42-202ENST00000404008 GMPPBQ9Y5P6 360 aa25.58■■□□□ 1.69
USP42-202ENST00000404008 PRODHO43272 600 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 TFP02787 698 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 PTDSS1P48651 473 aaKnown RBP25.57■■□□□ 1.68
USP42-202ENST00000404008 ZNF83P51522 516 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 LSM6P62312 80 aaKnown RBP25.57■■□□□ 1.68
USP42-202ENST00000404008 MEP1BQ16820 701 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 LINC01590Q5TEZ4 76 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 OTPQ5XKR4 325 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 FAM169BQ8N8A8 192 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 IL4I1Q96RQ9 567 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 OR51V1Q9H2C8 321 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 KCNN2Q9H2S1 579 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 MOKQ9UQ07 419 aa25.57■■□□□ 1.68
USP42-202ENST00000404008 DEFB108AA8MXU0 73 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 SIAH2O43255 324 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 IGKV3-15P01624 115 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 HLA-DQA2P01906 255 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 MMP7P09237 267 aaPredicted RBP25.56■■□□□ 1.68
USP42-202ENST00000404008 CBR1P16152 277 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 SLC2A5P22732 501 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 RAB1AP62820 205 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 TEKQ02763 1124 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 ZNF555Q8NEP9 628 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 OR8J1Q8NGP2 316 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 OR6K6Q8NGW6 343 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 MRPL22Q9NWU5 206 aaKnown RBP25.56■■□□□ 1.68
USP42-202ENST00000404008 IMPAD1Q9NX62 359 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 A6NNC1 897 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 C12orf71A8MTZ7 269 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 GLCEO94923 617 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 HRGP04196 525 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 ARR3P36575 388 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 KEAP1Q14145 624 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 LYPD4Q6UWN0 246 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 TRUB1Q8WWH5 349 aaKnown RBP25.56■■□□□ 1.68
USP42-202ENST00000404008 ZNF75AQ96N20 296 aa25.56■■□□□ 1.68
USP42-202ENST00000404008 IGLV1-44P01699 117 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 FMO3P31513 532 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 BLVRAP53004 296 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 C3orf36Q3SXR2 165 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 KLHL12Q53G59 568 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 BEX5Q5H9J7 111 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 SLC35D3Q5M8T2 416 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 AADACL4Q5VUY2 407 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 TMEM53Q6P2H8 277 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 BCDIN3DQ7Z5W3 292 aaKnown RBP25.55■■□□□ 1.68
USP42-202ENST00000404008 ZSCAN2Q7Z7L9 614 aaPredicted RBP25.55■■□□□ 1.68
USP42-202ENST00000404008 SYT9Q86SS6 491 aa25.55■■□□□ 1.68
USP42-202ENST00000404008 UBE2FQ969M7 185 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms