RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FOXE1O00358 373 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 BTN3A3O00478 584 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NDUFAB1O14561 156 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TOX3O15405 576 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4F21O95013 312 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CAPN1P07384 714 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 FCGR3AP08637 254 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 UCP1P25874 307 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 PRDX6P30041 224 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 PRDX3P30048 256 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CMPK1P30085 196 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 PEBP1P30086 187 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 HMOX2P30519 316 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SERPINB1P30740 379 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CAPZBP47756 277 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCR8P51685 355 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 ARFIP1P53367 373 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 AQP5P55064 265 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 ERVPABLB-1P60509 514 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CSNK1G2P78368 415 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CHIT1Q13231 466 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 DOC2AQ14183 400 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 ANKRD55Q3KP44 614 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 FBXO48Q5FWF7 155 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 XKR7Q5GH72 579 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NHLRC3Q5JS37 347 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 METTL21CQ5VZV1 264 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CGB2Q6NT52 195 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 MED27Q6P2C8 311 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SPESP1Q6UW49 350 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 EPGNQ6UW88 154 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TMIGD1Q6UXZ0 262 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RPS27LQ71UM5 84 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SYVN1Q86TM6 617 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 YRDCQ86U90 279 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TBC1D19Q8N5T2 526 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SNX31Q8N9S9 440 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TTLQ8NG68 377 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR2L3Q8NG85 312 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR4E2Q8NGC2 313 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 FLVCR1-AS1Q8TAF5 88 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TWIST2Q8WVJ9 160 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NEIL2Q969S2 332 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 MED8Q96G25 268 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 AIF1LQ9BQI0 150 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RBM24Q9BX46 236 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RHBGQ9H310 441 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 MEAF6Q9HAF1 191 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 MRPS30Q9NP92 439 aaKnown RBP3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NRN1Q9NPD7 142 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RPS10P5Q9NQ39 176 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NMRK1Q9NWW6 199 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 HRASLS2Q9NWW9 162 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SEC14L4Q9UDX3 406 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 CIDEBQ9UHD4 219 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 TAC3Q9UHF0 121 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 SNX6Q9UNH7 406 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 ARL2BPQ9Y2Y0 163 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 RNF11Q9Y3C5 154 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 ZNF175Q9Y473 711 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NUP210LQ5VU65 1888 aa3.87□□□□□ -1.79
HMGB3P19-201ENST00000403971 NINQ8N4C6 2090 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 GVINP1Q7Z2Y8 2422 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 IGHV1OR21-1A0A087WYE8 117 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 IGKV1-8A0A0C4DH67 115 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 A0A0G2JND7 137 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 GOLGA8QA0A0J9YX86 632 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 A0A0J9YY10 115 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 GOLGA8OA6NCC3 632 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 OR6C74A6NCV1 312 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 CFAP73A6NFT4 308 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 TLCD2A6NGC4 264 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 FOXI3A8MTJ6 420 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 E7EQ34 232 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 GOLGA8NF8WBI6 632 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 MANBAO00462 879 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 SDHDO14521 159 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 CDX4O14627 284 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 DUX1O43812 170 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 CCDC22O60826 627 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 DCTN3O75935 186 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 SEMA3DO95025 777 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 GP1BAP07359 652 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 SERPINA6P08185 405 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 UGT2B7P16662 529 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 TSPAN8P19075 237 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 ACP1P24666 158 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 PTPN4P29074 926 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 MRPL19P49406 292 aaKnown RBP3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 FOXA1P55317 472 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 RAG2P55895 527 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 RPS15AP62244 130 aaKnown RBP3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 REEP5Q00765 189 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 IFT88Q13099 833 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 ILKQ13418 452 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 ADPRMQ3LIE5 342 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 FAM219BQ5XKK7 198 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 REP15Q6BDI9 236 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 CLEC6AQ6EIG7 209 aa3.86□□□□□ -1.79
HMGB3P19-201ENST00000403971 WDR74Q6RFH5 385 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms