RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF620Q6ZNG0 422 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 AQP12AQ8IXF9 295 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 AQP11Q8NBQ7 271 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CPEB3Q8NE35 698 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TSSK2Q96PF2 358 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SMR3AQ99954 134 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IFT27Q9BW83 186 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NUAK2Q9H093 628 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 KCNN2Q9H2S1 579 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 H7C1Q1 480 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DCTN6O00399 190 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SSX4O60224 188 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 LY6HO94772 140 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TXNDC12O95881 172 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IGFBP1P08833 259 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 HIST1H1CP16403 213 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC6A6P31641 620 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GUCA1AP43080 201 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PSG4Q00888 419 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GALK2Q01415 458 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 HSF2Q03933 536 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ENDOGQ14249 297 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CLEC12BQ2HXU8 276 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 DPPA2Q7Z7J5 298 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR4K13Q8NH42 304 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 POP5Q969H6 163 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF416Q9BWM5 594 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PLA2G12AQ9BZM1 189 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR51B6Q9H340 312 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZNF442Q9H7R0 627 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CCNB1IP1Q9NPC3 277 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 POLE4Q9NR33 117 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 VSX1Q9NZR4 365 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FBXL3Q9UKT7 428 aa12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ARFGEF3Q5TH69 2177 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TMEM129A0AVI4 362 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 B9A039 149 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 H7C417 338 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SMAD7O15105 426 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ARPC3O15145 178 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 AHCYL1O43865 530 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MPZL1O95297 269 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 GPANK1O95872 356 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CST2P09228 141 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FAM157BP0CG42 384 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 BMP4P12644 408 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 APEHP13798 732 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 MSR1P21757 451 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 CCNOP22674 350 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 NOS3P29474 1203 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PLP2Q04941 152 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TNK1Q13470 666 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SLC35F1Q5T1Q4 408 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ADCK1Q86TW2 530 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 SVOPLQ8N434 492 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 OR8D4Q8NGM9 314 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 C18orf12Q96KH6 178 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 FZR1Q9UM11 496 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 PMF1-BGLAPU3KQ54 211 aa12.15□□□□□ -0.46
HLA-DQB1-202ENST00000399079 LOC100509620A0A075B734 347 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TCRBV3S1A0A5B6 114 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SOX14O95416 240 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 INHBBP09529 407 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 STOMP27105 288 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RASSF2P50749 326 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 EFNB3Q15768 340 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TBC1D28Q2M2D7 210 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SLCO4A1Q96BD0 722 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SORCS2Q96PQ0 1159 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NIPSNAP1Q9BPW8 284 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MRPL37Q9BZE1 423 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR2H1Q9GZK4 316 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CDH20Q9HBT6 801 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 IL20Q9NYY1 176 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CMAHPQ9Y471 501 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SPEF1Q9Y4P9 236 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CDH10Q9Y6N8 788 aa12.14□□□□□ -0.47
HLA-DQB1-202ENST00000399079 BHLHE40O14503 412 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GNGT2O14610 69 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 KHDRBS3O75525 346 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ATP5HO75947 161 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms