RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZNF275Q9NSD4 429 aaPredicted RBP8.95□□□□□ -0.98
PTCHD4-202ENST00000398738 HRKO00198 91 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 EFEMP2O95967 443 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 PPM1FP49593 454 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 SPOCK1Q08629 439 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 FHL1Q13642 323 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ERV3-1Q14264 604 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ELAVL3Q14576 367 aaKnown RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 HNRNPA1L2Q32P51 320 aaKnown RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 GLYATL3Q5SZD4 288 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ATPAF1Q5TC12 328 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 DGAT2L6Q6ZPD8 337 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 TMPPEQ6ZT21 453 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ANKRD33Q7Z3H0 272 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 PM20D2Q8IYS1 436 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ARMC10Q8N2F6 343 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 GVQW1Q8N7I0 195 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ELP5Q8TE02 316 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 SERGEFQ9UGK8 458 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 RNF222A6NCQ9 220 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF736B4DX44 427 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 BCL2L11O43521 198 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 EIF4E2O60573 245 aaKnown RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 EML2O95834 649 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 FABP1P07148 127 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 CASRP41180 1078 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 MAP3K8P41279 467 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 PPT1P50897 306 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 IL13RA1P78552 427 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 DPTQ07507 201 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 SMCO1Q147U7 214 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 RAB11BQ15907 218 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 KLHL26Q53HC5 615 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 AVPI1Q5T686 147 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 FCRL6Q6DN72 434 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 KCNRGQ8N5I3 272 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 OR2G2Q8NGZ5 317 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF764Q96H86 408 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 POTEKPQ9BYX7 375 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC19A3Q9BZV2 496 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 TAS2R8Q9NYW2 309 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 DEC1Q9P2X7 70 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 MSRAQ9UJ68 235 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 SEC16AO15027 2179 aa8.94□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF208O43345 1280 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PMS2P2O95744 297 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 WNT11O96014 354 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ACAA1P09110 424 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PI3P19957 117 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 RFC3P40938 356 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 LSSP48449 732 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 POLR2GP62487 172 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SREBF2Q12772 1141 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ZNF528Q3MIS6 628 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MOGAT2Q3SYC2 334 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 NKAPLQ5M9Q1 402 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 LCE2CQ5TA81 110 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ANKRD16Q6P6B7 361 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PSRC1Q6PGN9 363 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SLC39A5Q6ZMH5 540 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 TMPRSS9Q7Z410 1059 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PARGQ86W56 976 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CDRT4Q8N9R6 151 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CLEC1AQ8NC01 280 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 OR2L8Q8NGY9 312 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 GPR148Q8TDV2 347 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 GLYATL2Q8WU03 294 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 C20orf24Q9BUV8 137 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SYT4Q9H2B2 425 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 KCNG2Q9UJ96 466 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 TNFSF18Q9UNG2 199 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 TMED7Q9Y3B3 224 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ENTPD2Q9Y5L3 495 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CTSVO60911 334 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CSTAP01040 98 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PPP1R1AQ13522 171 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 PDGFRLQ15198 375 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 DMRTC1Q5HYR2 192 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ACOT7LQ6ZUV0 252 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MDGA2Q7Z553 956 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 IL22RA1Q8N6P7 574 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CCL4L1Q8NHW4 92 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 COX14Q96I36 57 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MOGAT1Q96PD6 335 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CST11Q9H112 138 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 SFXN1Q9H9B4 322 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 LRIT1Q9P2V4 623 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 UPB1Q9UBR1 384 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ICAM5Q9UMF0 924 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 DAPP1Q9UN19 280 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 C19orf53Q9UNZ5 99 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 CDC40O60508 579 aaKnown RBP eCLIP8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 ICOSLGO75144 302 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 MOSPD3O75425 235 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 UPK3AO75631 287 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 GLCEO94923 617 aa8.93□□□□□ -0.98
PTCHD4-202ENST00000398738 DAOP14920 347 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms