RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 ZNF416Q9BWM5 594 aa13.69□□□□□ -0.22
MBD1-207ENST00000398488 HCAR1Q9BXC0 346 aa13.69□□□□□ -0.22
MBD1-207ENST00000398488 HEATR1Q9H583 2144 aaKnown RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 UBL3O95164 117 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 GAAP10253 952 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 CLUP10909 449 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ZNF32P17041 273 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ARR3P36575 388 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 POLR2IP36954 125 aaKnown RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 ARHGDIAP52565 204 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 HGFACQ04756 655 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 C1QTNF12Q5T7M4 302 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ZFP1Q6P2D0 407 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 SLC22A25Q6T423 547 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ZBTB46Q86UZ6 589 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ZDHHC13Q8IUH4 622 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 PAQR4Q8N4S7 273 aaPredicted RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 OR51L1Q8NGJ5 315 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 OR9Q1Q8NGQ5 310 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 TEX47Q8TBZ9 253 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 SNX18Q96RF0 628 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 RBM4Q9BWF3 364 aaKnown RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 MED20Q9H944 212 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 ZNF556Q9HAH1 456 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 PAPOLBQ9NRJ5 636 aaKnown RBP13.68□□□□□ -0.22
MBD1-207ENST00000398488 ST6GALNAC2Q9UJ37 374 aa13.68□□□□□ -0.22
MBD1-207ENST00000398488 RTTNQ86VV8 2226 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 NAV2Q8IVL1 2488 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 IGHV2OR16-5A0A0B4J2B6 119 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 FAM183AA6NL82 134 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 HS3ST1O14792 307 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 ATE1O95260 518 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 RENP00797 406 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 TFP02787 698 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 GYPBP06028 91 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 PSKH1P11801 424 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 NR2C1P13056 603 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 CCL2P13500 99 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 NPR2P20594 1047 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 MSR1P21757 451 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 PPP2R2BQ00005 443 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 PSG4Q00888 419 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 C3orf36Q3SXR2 165 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 PAMR1Q6UXH9 720 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 CDH24Q86UP0 819 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 AKR7LQ8NHP1 331 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 IGFBPL1Q8WX77 278 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 RADILQ96JH8 1075 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 NMNAT2Q9BZQ4 307 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 KIF17Q9P2E2 1029 aa13.67□□□□□ -0.22
MBD1-207ENST00000398488 FARS2O95363 451 aaKnown RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 SOD3P08294 240 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CST2P09228 141 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CD53P19397 219 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 GRK5P34947 590 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CRISP1P54107 249 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CDH11P55287 796 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 PABPC1L2AQ5JQF8 200 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 SLC27A4Q6P1M0 643 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 PARP8Q8N3A8 854 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 NANOS1Q8WY41 292 aaKnown RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CIB1Q99828 191 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 OSBPL10Q9BXB5 764 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 RNF121Q9H920 327 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 CMC2Q9NRP2 79 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 MRPL22Q9NWU5 206 aaKnown RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 CISD1Q9NZ45 108 aaKnown RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 BAIAP2Q9UQB8 552 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 FKBP7Q9Y680 259 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 ATP23Q9Y6H3 246 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 MAST4O15021 2626 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 PLCE1Q9P212 2302 aa13.66□□□□□ -0.22
MBD1-207ENST00000398488 ANKRD17O75179 2603 aaKnown RBP13.66□□□□□ -0.22
MBD1-207ENST00000398488 M0R129 80 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 RAB36O95755 333 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 SERPINA5P05154 406 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 DANCRP0C864 163 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 ZNF35P13682 527 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
MBD1-207ENST00000398488 CENPAP49450 140 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 KCNMB1Q16558 191 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 MSMPQ1L6U9 139 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 SLC36A2Q495M3 483 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 ZNF774Q6NX45 483 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 ZNF611Q8N823 705 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 SLC26A10Q8NG04 563 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 OR2H1Q9GZK4 316 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 SLC25A19Q9HC21 320 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
MBD1-207ENST00000398488 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
MBD1-207ENST00000398488 TVP23AA6NH52 213 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms