RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 MSR1P21757 451 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 ESRRGP62508 458 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 NRGNQ92686 78 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 OTULINQ96BN8 352 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 MS4A3Q96HJ5 214 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 RNF121Q9H920 327 aa22.08■■□□□ 1.13
TMEM55B-202ENST00000398020 IFNGP01579 166 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 IGKV3-15P01624 115 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ALPLP05186 524 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 GYPBP06028 91 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 CECR9P0C854 216 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ANPEPP15144 967 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 PTAFRP25105 342 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 PYCR1P32322 319 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 POLR2IP36954 125 aaKnown RBP22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 DAG1Q14118 895 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 SLC36A2Q495M3 483 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 C1QTNF12Q5T7M4 302 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 FAM27BQ5VT28 67 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF704Q6ZNC4 412 aaPredicted RBP22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 OR51L1Q8NGJ5 315 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNRF4Q8WWF5 429 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 FBXO17Q96EF6 278 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF416Q9BWM5 594 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 RIBC2Q9H4K1 309 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 MED20Q9H944 212 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 SLC25A19Q9HC21 320 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 CRNNQ9UBG3 495 aaPredicted RBP22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 RNF115Q9Y4L5 304 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 CYSRT1A8MQ03 144 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 RAB36O95755 333 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 CLUP10909 449 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF3P17036 446 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ARR3P36575 388 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 ZBTB46Q86UZ6 589 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 KBTBD8Q8NFY9 601 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 NEUROG1Q92886 237 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 EME1Q96AY2 570 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 TMEM204Q9BSN7 226 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 HCAR1Q9BXC0 346 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 FKBP7Q9Y680 259 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 AKAP6Q13023 2319 aa22.07■■□□□ 1.12
TMEM55B-202ENST00000398020 CSMD1Q96PZ7 3565 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 SURF4O15260 269 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 IGLV1-44P01699 117 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 ENDOGQ14249 297 aaKnown RBP22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 RAB39AQ14964 217 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 MEP1BQ16820 701 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 PROKR2Q8NFJ6 384 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF75AQ96N20 296 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 SLC29A1Q99808 456 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 C9orf16Q9BUW7 83 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 RACGAP1Q9H0H5 632 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 KCNN2Q9H2S1 579 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 TVP23BQ9NYZ1 205 aa22.06■■□□□ 1.12
TMEM55B-202ENST00000398020 HEATR1Q9H583 2144 aaKnown RBP22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 NOTCH2Q04721 2471 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 MMP7P09237 267 aaPredicted RBP22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 ALDH3A2P51648 485 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 SLC22A25Q6T423 547 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 OR2T4Q8NH00 348 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 C11orf40Q8WZ69 217 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 LIME1Q9H400 295 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 CCNB1IP1Q9NPC3 277 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 USE1Q9NZ43 259 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 MOKQ9UQ07 419 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 SPG11Q96JI7 2443 aa22.05■■□□□ 1.12
TMEM55B-202ENST00000398020 M0R129 80 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 HLA-DQA2P01906 255 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 HMGN1P05114 100 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 GAAP10253 952 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF14P17017 642 aaPredicted RBP22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF32P17041 273 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 GLO1Q04760 184 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 TMEM53Q6P2H8 277 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 LYPD4Q6UWN0 246 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZBTB49Q6ZSB9 765 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 FAM169BQ8N8A8 192 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 LILRB1Q8NHL6 650 aaPredicted RBP22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 PLEKHA8Q96JA3 519 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 RADILQ96JH8 1075 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 NMNAT2Q9BZQ4 307 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 PLEKHF2Q9H8W4 249 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 MOV10Q9HCE1 1003 aaKnown RBP22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZAR1LA6NP61 321 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 SHISA9B4DS77 424 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ATP6V1G2-DDX39BF2Z307 99 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 MGRN1O60291 552 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 TFP02787 698 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 CST2P09228 141 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 SPI1P17947 270 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 TRIP10Q15642 601 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 SNAPC1Q16533 368 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 LRRC36Q1X8D7 754 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZIK1Q3SY52 487 aaPredicted RBP22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 ZNF584Q8IVC4 421 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 TEX12Q9BXU0 123 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 GABARAPL3Q9BY60 117 aa22.04■■□□□ 1.12
TMEM55B-202ENST00000398020 UBTD1Q9HAC8 227 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms