RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF773Q6PK81 442 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 B3GLCTQ6Y288 498 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 ZNF813Q6ZN06 617 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 TUBA1AQ71U36 451 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 MUC15Q8N387 334 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
SEC13-208ENST00000397109 BPIFA2Q96DR5 249 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 FOXB1Q99853 325 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 DGCR6LQ9BY27 220 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 RIBC2Q9H4K1 309 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 BARX1Q9HBU1 254 aaPredicted RBP12.67□□□□□ -0.38
SEC13-208ENST00000397109 SCN3BQ9NY72 215 aa12.67□□□□□ -0.38
SEC13-208ENST00000397109 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
SEC13-208ENST00000397109 INHBBP09529 407 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 CECR9P0C854 216 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 IFI30P13284 250 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 JUNBP17275 347 aaPredicted RBP12.66□□□□□ -0.38
SEC13-208ENST00000397109 CDKN1AP38936 164 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 AQP2P41181 271 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 CAPZA2P47755 286 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 NAAAQ02083 359 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 PRKCDQ05655 676 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 MELKQ14680 651 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 BIVMQ86UB2 503 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 WDFY1Q8IWB7 410 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 NRMQ8IXM6 262 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 CDK20Q8IZL9 346 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 OR4K5Q8NGD3 323 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 OR52J3Q8NH60 311 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 CCNB1IP1Q9NPC3 277 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 TMEM5Q9Y2B1 443 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 PCDHGB1Q9Y5G3 927 aa12.66□□□□□ -0.38
SEC13-208ENST00000397109 VSTM5A8MXK1 200 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 MITFO75030 526 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 SEC14L2O76054 403 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 F13BP05160 661 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 PGA4P0DJD7 388 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 PGA3P0DJD8 388 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 GGT2P36268 569 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 RIPPLY3P57055 190 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 CLRN1P58418 232 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEC13-208ENST00000397109 IL5RAQ01344 420 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 C11orf71Q6IPW1 123 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 TMPRSS11FQ6ZWK6 438 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 MDP1Q86V88 176 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 SATL1Q86VE3 508 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 IPCEF1Q8WWN9 437 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 PLCXD1Q9NUJ7 323 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 SETD2Q9BYW2 2564 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 H7C1Q1 480 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 DHHO43323 396 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 PIP5K1CO60331 668 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 SAGP10523 405 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 CD79AP11912 226 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 NR2C1P13056 603 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 B4GALT1P15291 398 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 GSTM3P21266 225 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 POLR2IP36954 125 aaKnown RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 OMPP47874 163 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 SLC9A3P48764 834 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 IDH3GP51553 393 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 LAPTM4AQ15012 233 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 ZBED5Q49AG3 693 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 ALG10Q5BKT4 473 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 C1orf94Q6P1W5 598 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 LRFN4Q6PJG9 635 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 MOSPD2Q8NHP6 518 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 TRUB1Q8WWH5 349 aaKnown RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 ASB10Q8WXI3 467 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 CACNG6Q9BXT2 260 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 TXNIPQ9H3M7 391 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 KRCC1Q9NPI7 259 aaPredicted RBP12.65□□□□□ -0.38
SEC13-208ENST00000397109 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 PMF1-BGLAPU3KQ54 211 aa12.65□□□□□ -0.38
SEC13-208ENST00000397109 EFCAB9A8MZ26 197 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 SLC1A7O00341 560 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 TRMUO75648 421 aaKnown RBP12.64□□□□□ -0.39
SEC13-208ENST00000397109 UBL3O95164 117 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 FARS2O95363 451 aaKnown RBP12.64□□□□□ -0.39
SEC13-208ENST00000397109 GASTP01350 101 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 HLA-HP01893 362 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 QDPRP09417 244 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 OSMP13725 252 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 EEF1B2P24534 225 aaKnown RBP12.64□□□□□ -0.39
SEC13-208ENST00000397109 ZNF84P51523 738 aa12.64□□□□□ -0.39
SEC13-208ENST00000397109 MAD2L1BPQ15013 274 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms