RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 SERPINF1P36955 418 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 LCN6P62502 163 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 SNTB2Q13425 540 aaKnown RBP11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 DAG1Q14118 895 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 RPL13AP3Q6NVV1 102 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 PTCHD4Q6ZW05 846 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 SYT9Q86SS6 491 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 LRRC18Q8N456 261 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 OR9Q2Q8NGE9 314 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 FBXO17Q96EF6 278 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 C18orf12Q96KH6 178 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 BDH2Q9BUT1 245 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 DGCR6LQ9BY27 220 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 KCNN2Q9H2S1 579 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 REEP1Q9H902 201 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 POLE4Q9NR33 117 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 IL20Q9NYY1 176 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 SLC7A8Q9UHI5 535 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 FBXO9Q9UK97 447 aaPredicted RBP11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 POMPQ9Y244 141 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 PMF1-BGLAPU3KQ54 211 aa11.53□□□□□ -0.56
HLA-DMA-202ENST00000395303 TMEM129A0AVI4 362 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 DHRS12A0PJE2 317 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SOCS2O14508 198 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 CCNB2O95067 398 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 PPP1R3DO95685 299 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SCG5P05408 212 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 BMP4P12644 408 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 ZNF32P17041 273 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 MSR1P21757 451 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 PCSK6P29122 969 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 CDKN2AP42771 156 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 RASSF2P50749 326 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 ENDOGQ14249 297 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 FLOT2Q14254 428 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SGCAQ16586 387 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 MICAQ29983 383 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 RASSF6Q6ZTQ3 369 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 PAPD5Q8NDF8 572 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SLC30A7Q8NEW0 376 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SAMD8Q96LT4 415 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 ERMAPQ96PL5 475 aaPredicted RBP11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 DOK1Q99704 481 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 CHID1Q9BWS9 393 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 RNF121Q9H920 327 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SAMHD1Q9Y3Z3 626 aaKnown RBP11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 SPEF1Q9Y4P9 236 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
HLA-DMA-202ENST00000395303 IQCMA0A1B0GVH7 501 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 ARRDC5A6NEK1 342 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 VSTM5A8MXK1 200 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 KHDRBS3O75525 346 aaKnown RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CST1P01037 141 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 GASTP01350 101 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 INHBBP09529 407 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 OR4A8P0C604 315 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 LAP3P28838 519 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 GUCA1AP43080 201 aaPredicted RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 EVX1P49640 407 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 PPOXP50336 477 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 RPS23P62266 143 aaKnown RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 PSG4Q00888 419 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 PLP2Q04941 152 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 MSMPQ1L6U9 139 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CLEC12BQ2HXU8 276 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 PABPC1L2AQ5JQF8 200 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CD300LDQ6UXZ3 194 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CPEB3Q8NE35 698 aaKnown RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 OR1J2Q8NGS2 313 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 OR2H1Q9GZK4 316 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 NUAK2Q9H093 628 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 MMADHCQ9H3L0 296 aaPredicted RBP11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CCNB1IP1Q9NPC3 277 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 CMAHPQ9Y471 501 aa11.51□□□□□ -0.57
HLA-DMA-202ENST00000395303 IGLV1-36A0A0B4J1U3 117 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 A0A1W2PPL8 197 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 BHLHE40O14503 412 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 GPRIN2O60269 458 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 TP53P04637 393 aaPredicted RBP11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 GSTM3P21266 225 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 APEX1P27695 318 aaKnown RBP11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 CRABP1P29762 137 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 PCBD1P61457 104 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 SNRPD2P62316 118 aaKnown RBP11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 GALK2Q01415 458 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 HSF2Q03933 536 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 PPP1R8Q12972 351 aaKnown RBP11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 RAB35Q15286 201 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 TBC1D28Q2M2D7 210 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 VHLLQ6RSH7 139 aa11.5□□□□□ -0.57
HLA-DMA-202ENST00000395303 CIARTQ8N365 385 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms