RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 GDI2P50395 445 aaKnown RBP17.85■□□□□ 0.45
TRAF4-203ENST00000394925 SLC18A1P54219 525 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 UGT2B15P54855 530 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 MAGOHP61326 146 aaKnown RBP17.85■□□□□ 0.45
TRAF4-203ENST00000394925 MRPS34P82930 218 aaKnown RBP17.85■□□□□ 0.45
TRAF4-203ENST00000394925 SGCAQ16586 387 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 CYP51A1Q16850 503 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 TUSC1Q2TAM9 212 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 RUNDC3AQ59EK9 446 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 C10orf128Q5T292 105 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 MBNL2Q5VZF2 373 aaKnown RBP17.85■□□□□ 0.45
TRAF4-203ENST00000394925 TREML4Q6UXN2 200 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 UNQ6126/PRO20091Q6UXV3 157 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 DLEU7Q6UYE1 221 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 C1orf147Q96MC9 270 aaPredicted RBP17.85■□□□□ 0.45
TRAF4-203ENST00000394925 GPA33Q99795 319 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 EBF4Q9BQW3 602 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 ZNF426Q9BUY5 554 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 MSL2Q9HCI7 577 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 NPHS2Q9NP85 383 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 CYSLTR2Q9NS75 346 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 UGT2A1Q9Y4X1 527 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 AUP1Q9Y679 476 aa17.85■□□□□ 0.45
TRAF4-203ENST00000394925 CENPBD1B2RD01 187 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 ADH4P08319 380 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 IDH3AP50213 366 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 ZNF133P52736 654 aaPredicted RBP17.84■□□□□ 0.45
TRAF4-203ENST00000394925 PSG4Q00888 419 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 BAMBIQ13145 260 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 KLF17Q5JT82 389 aaPredicted RBP17.84■□□□□ 0.45
TRAF4-203ENST00000394925 RFPL4BQ6ZWI9 263 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 ABHD4Q8TB40 342 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 NSMAFQ92636 917 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 NABP1Q96AH0 204 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 PRSS27Q9BQR3 290 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 INIPQ9NRY2 104 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 PLEK2Q9NYT0 353 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 EGFL7Q9UHF1 273 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 ZDHHC8Q9ULC8 765 aa17.84■□□□□ 0.45
TRAF4-203ENST00000394925 IGKV1D-43A0A0B4J1Z2 117 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 TRAPPC2LH3BP13 241 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 IGHV2-70P01814 119 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 FUT1P19526 365 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 CD247P20963 164 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 LIPAP38571 399 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 AQP2P41181 271 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 DAP3P51398 398 aaKnown RBP17.83■□□□□ 0.44
TRAF4-203ENST00000394925 PPP1CBP62140 327 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 ERVK-25P63136 954 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 FMODQ06828 376 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 ZNF154Q13106 437 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 HDDC2Q7Z4H3 204 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 ZNF48Q96MX3 618 aaPredicted RBP17.83■□□□□ 0.44
TRAF4-203ENST00000394925 ZMAT3Q9HA38 289 aaKnown RBP17.83■□□□□ 0.44
TRAF4-203ENST00000394925 KLHL21Q9UJP4 597 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 CMYA5Q8N3K9 4069 aa17.83■□□□□ 0.44
TRAF4-203ENST00000394925 ERLIN1O75477 346 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 TGDSO95455 350 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 NGFP01138 241 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 IGHMP01871 453 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 CD55P08174 381 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 MTPNP58546 118 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 TNFAIP6P98066 277 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-203ENST00000394925 CD47Q08722 323 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 SELPLGQ14242 412 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 ARMC4Q5T2S8 1044 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 PFN4Q8NHR9 129 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 SLC26A7Q8TE54 656 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 HDAC2Q92769 488 aaKnown RBP17.82■□□□□ 0.44
TRAF4-203ENST00000394925 TAF15Q92804 592 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRAF4-203ENST00000394925 DIRC2Q96SL1 478 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 CCDC28BQ9BUN5 200 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 PCDHAC1Q9H158 963 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 NANOGQ9H9S0 305 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 TMEM106BQ9NUM4 274 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 CGGBP1Q9UFW8 167 aaPredicted RBP17.82■□□□□ 0.44
TRAF4-203ENST00000394925 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 VWFP04275 2813 aa17.82■□□□□ 0.44
TRAF4-203ENST00000394925 OR7A10O76100 309 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 MT-ND1P03886 318 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 ZNF12P17014 697 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 SEC61A1P61619 476 aaKnown RBP17.81■□□□□ 0.44
TRAF4-203ENST00000394925 ZMAT1Q5H9K5 638 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 DHDDSQ86SQ9 333 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 PATL1Q86TB9 770 aaKnown RBP17.81■□□□□ 0.44
TRAF4-203ENST00000394925 C1orf174Q8IYL3 243 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 KLHL36Q8N4N3 616 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 SPICQ8N5J4 248 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 MOSPD2Q8NHP6 518 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 SLC25A28Q96A46 364 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 TAMM41Q96BW9 452 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 MRI1Q9BV20 369 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 WNT5BQ9H1J7 359 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 SMURF2Q9HAU4 748 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 PATZ1Q9HBE1 687 aaKnown RBP17.81■□□□□ 0.44
TRAF4-203ENST00000394925 STX18Q9P2W9 335 aaKnown RBP17.81■□□□□ 0.44
TRAF4-203ENST00000394925 INSIG2Q9Y5U4 225 aa17.81■□□□□ 0.44
TRAF4-203ENST00000394925 TIMM8AO60220 97 aaPredicted RBP17.8■□□□□ 0.44
TRAF4-203ENST00000394925 RNASE1P07998 156 aaKnown RBP17.8■□□□□ 0.44
TRAF4-203ENST00000394925 VIMP08670 466 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms