RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 TRAV1-2A0A0B4J238 106 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 LIPT2A6NK58 231 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SSR4P51571 173 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 GPR176Q14439 515 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SFRP4Q6FHJ7 346 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF679Q8IYX0 411 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 OR2Y1Q8NGV0 311 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MFSD8Q8NHS3 518 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 SYNPRQ8TBG9 265 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZC3H10Q96K80 434 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 RBFOX1Q9NWB1 397 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF221Q9UK13 617 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 IGLV1-36A0A0B4J1U3 117 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 TMEM269A0A1B0GVZ9 245 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MEIS3P1A6NDR6 274 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 OR4C45A6NMZ5 311 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF726A6NNF4 738 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MT-ND4P03905 459 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 COX6A1P12074 109 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 PTGDSP41222 190 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 DAP3P51398 398 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 CCR6P51684 374 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 MC2RQ01718 297 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ZNF684Q5T5D7 378 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 OR2M3Q8NG83 312 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 ELP5Q8TE02 316 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 OIT3Q8WWZ8 545 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 OR8B4Q96RC9 309 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 GFI1Q99684 422 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 RANGRFQ9HD47 186 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 DKKL1Q9UK85 242 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 NXT1Q9UKK6 140 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 LRP12Q9Y561 859 aa9.97□□□□□ -0.81
TCOF1-203ENST00000394269 CHCHD2Q9Y6H1 151 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-203ENST00000394269 PDCD5O14737 125 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 H2BFMP0C1H6 154 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 SP9P0CG40 484 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 TMIGD3P0DMS9 266 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-203ENST00000394269 ADRA2CP18825 462 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 GNALP38405 381 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 KIR3DL2P43630 455 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 PLA2G7Q13093 441 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 TAF13Q15543 124 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 NTRK2Q16620 822 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 SLC22A10Q63ZE4 541 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 C3orf33Q6P1S2 294 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 LYPD8Q6UX82 237 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 YRDCQ86U90 279 aaKnown RBP9.96□□□□□ -0.81
TCOF1-203ENST00000394269 SCAIQ8N9R8 606 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 OR51D1Q8NGF3 324 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 NKD1Q969G9 470 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-203ENST00000394269 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-203ENST00000394269 NUDT15Q9NV35 164 aa9.96□□□□□ -0.81
TCOF1-203ENST00000394269 DSPP15924 2871 aaKnown RBP9.96□□□□□ -0.82
TCOF1-203ENST00000394269 INMT-MINDY4F8WBC2 141 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 ABHD16AO95870 558 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 IGF2P01344 180 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 GSTT2P0CG29 244 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 GSTT2BP0CG30 244 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 GIFP27352 417 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 HOXD12P35452 270 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 RPS15P62841 145 aaKnown RBP9.96□□□□□ -0.82
TCOF1-203ENST00000394269 SPOCK1Q08629 439 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 SPEM2Q0P670 501 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 SGCAQ16586 387 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 BCL2L15Q5TBC7 163 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 FAAP20Q6NZ36 180 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 OPN5Q6U736 354 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 DHRS13Q6UX07 377 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 SIAH3Q8IW03 269 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 JAGN1Q8N5M9 183 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 BEST4Q8NFU0 473 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 OR1J4Q8NGS1 313 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 UPRTQ96BW1 309 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 MRGPRX4Q96LA9 322 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 TP63Q9H3D4 680 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-203ENST00000394269 KLK11Q9UBX7 282 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 DHDHQ9UQ10 334 aa9.96□□□□□ -0.82
TCOF1-203ENST00000394269 NAGAP17050 411 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 RBMS1P29558 406 aaKnown RBP9.95□□□□□ -0.82
TCOF1-203ENST00000394269 EGR3Q06889 387 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 MFSD13AQ14CX5 517 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 PYHIN1Q6K0P9 492 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 TIPARPQ7Z3E1 657 aaKnown RBP9.95□□□□□ -0.82
TCOF1-203ENST00000394269 PLCZ1Q86YW0 608 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 GLB1L2Q8IW92 636 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 ASB10Q8WXI3 467 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 KIAA1143Q96AT1 154 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-203ENST00000394269 PHF21AQ96BD5 680 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 C4orf45Q96LM5 186 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 SOSTQ9BQB4 213 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 SLC26A1Q9H2B4 701 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 SPATA2Q9UM82 520 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 PCNX2A6NKB5 2137 aa9.95□□□□□ -0.82
TCOF1-203ENST00000394269 LOC101059948A0A1B0GTJ6 334 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms