RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZNF629Q9UEG4 869 aaPredicted RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 F12P00748 615 aaPredicted RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SBK2P0C263 348 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 NFYBP25208 207 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 TRA2AQ13595 282 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 ZNHIT3Q15649 155 aaPredicted RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 ELAVL1Q15717 326 aaKnown RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 HACD4Q5VWC8 232 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SPICQ8N5J4 248 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 PROKR2Q8NFJ6 384 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SLC7A13Q8TCU3 470 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SLC25A28Q96A46 364 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 ARHGDIGQ99819 225 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 CLN6Q9NWW5 311 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 CDC14CA4D256 554 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 CASKO14936 926 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 EEF1E1O43324 174 aaKnown RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 GKN3PP0CG01 181 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SDHBP21912 280 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 RPS4Y1P22090 263 aaKnown RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 IL11RAQ14626 422 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 CLEC2AQ6UVW9 174 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 OVCH1Q7RTY7 1134 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 GCDHQ92947 438 aaPredicted RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 NXF5Q9H1B4 397 aaKnown RBP17.16■□□□□ 0.34
CCDC50-202ENST00000392456 SLC25A19Q9HC21 320 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 CA10Q9NS85 328 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 FAM86C1Q9NVL1 165 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 NUP210LQ5VU65 1888 aa17.16■□□□□ 0.34
CCDC50-202ENST00000392456 NPIPB9F8W1W9 429 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 AP4M1O00189 453 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 GASTP01350 101 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 ELAVL4P26378 380 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 CCR9P51686 369 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 CDC42P60953 191 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 BLOC1S1P78537 153 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 TNFRSF9Q07011 255 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 PTGES3Q15185 160 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 SLC35D3Q5M8T2 416 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 MRPL2Q5T653 305 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 ARHGAP11AQ6P4F7 1023 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 PLPP5Q8NEB5 264 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 CCDC54Q8NEL0 328 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 OR6K3Q8NGY3 331 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 TLNRD1Q9H1K6 362 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 MYOZ1Q9NP98 299 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 TMEM9BQ9NQ34 198 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 CPSF4LA6NMK7 179 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 KDM4EB2RXH2 506 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 SYT5O00445 386 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 OR2A4O95047 310 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 THY1P04216 161 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 PAX1P15863 534 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 PKIAP61925 76 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 RPS25P62851 125 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 NHLH2Q02577 135 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 BIKQ13323 160 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF770Q6IQ21 691 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF613Q6PF04 617 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 BCORP1Q8N888 145 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 C15orf54Q8N8G6 183 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 OR4C3Q8NH37 302 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 ACOT11Q8WXI4 607 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 GTPBP3Q969Y2 492 aaKnown RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 WDR89Q96FK6 387 aaPredicted RBP17.15■□□□□ 0.34
CCDC50-202ENST00000392456 OR2A7Q96R45 310 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 FLRT3Q9NZU0 649 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 GAB2Q9UQC2 676 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 OR10H1Q9Y4A9 318 aa17.15■□□□□ 0.34
CCDC50-202ENST00000392456 H1F0P07305 194 aaKnown RBP17.14■□□□□ 0.34
CCDC50-202ENST00000392456 INSM1Q01101 510 aaPredicted RBP17.14■□□□□ 0.34
CCDC50-202ENST00000392456 C1DQ13901 141 aaKnown RBP17.14■□□□□ 0.34
CCDC50-202ENST00000392456 OR8G1Q15617 311 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 TRAM1Q15629 374 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 MEDAGQ5VYS4 303 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 TMPRSS11FQ6ZWK6 438 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 C9orf40Q8IXQ3 194 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF614Q8N883 585 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 OR4Q3Q8NH05 313 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 GNPDA2Q8TDQ7 276 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 OSTF1Q92882 214 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 LRFN5Q96NI6 719 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 FUZQ9BT04 418 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 Q9N2J8 555 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 CBLCQ9ULV8 474 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 B3GALT1Q9Y5Z6 326 aa17.14■□□□□ 0.34
CCDC50-202ENST00000392456 NID1P14543 1247 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF136P52737 540 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 KRBOX4Q5JUW0 171 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 PAQR6Q6TCH4 344 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 MEX3DQ86XN8 651 aaKnown RBP17.14■□□□□ 0.33
CCDC50-202ENST00000392456 PRR22Q8IZ63 422 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 PRSS33Q8NF86 280 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 HIST1H2BAQ96A08 127 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 C8orf44Q96CB5 159 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 TSPAN10Q9H1Z9 355 aaPredicted RBP17.14■□□□□ 0.33
CCDC50-202ENST00000392456 ISYNA1Q9NPH2 558 aa17.14■□□□□ 0.33
CCDC50-202ENST00000392456 SF3B6Q9Y3B4 125 aaKnown RBP17.14■□□□□ 0.33
CCDC50-202ENST00000392456 COL5A1P20908 1838 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms