RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ARL6IP5O75915 188 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 SP1P08047 785 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 UCHL1P09936 223 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 LAP3P28838 519 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 TNFSF8P32971 234 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 CAV3P56539 151 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 CLDN17P56750 224 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 MFAP5Q13361 173 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OTPQ5XKR4 325 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 HBMQ6B0K9 141 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 LRRN1Q6UXK5 716 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 PARP16Q8N5Y8 322 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR9K2Q8NGE7 335 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR2G2Q8NGZ5 317 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 SLC30A2Q9BRI3 323 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 TTTY12Q9BZ98 90 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 ELOVL3Q9HB03 270 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 RABL2AQ9UBK7 228 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 CNOT1A5YKK6 2376 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 IGHV3-15A0A0B4J1V0 119 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 NPIPA2E9PIF3 369 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 NPIPA3F8WFD2 350 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 H0YC42 278 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 SMAD9O15198 467 aaKnown RBP10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 NKX2-8O15522 239 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 POU3F2P20265 443 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 CARD18P57730 90 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 RASGEF1BQ0VAM2 473 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 HYAL4Q2M3T9 481 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 SLC25A25Q6KCM7 469 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR5AK2Q8NH90 309 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR2V1Q8NHB1 315 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 ST7LQ8TDW4 575 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 RNF128Q8TEB7 428 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 C11orf40Q8WZ69 217 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 RGP1Q92546 391 aaPredicted RBP10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 MCHR2Q969V1 340 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 DCBLD2Q96PD2 775 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR14A2Q96R54 314 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 ATF6BQ99941 703 aa10.18□□□□□ -0.78
SMARCAL1-203ENST00000392128 TMEM212A6NML5 194 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR4C45A6NMZ5 311 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 KLRC4-KLRK1H3BQV0 150 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 TMCC2O75069 709 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 NCR1O76036 304 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 GLSO94925 669 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF12P17014 697 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ENPP1P22413 925 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 PSMD7P51665 324 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 CCR9P51686 369 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 SUCLG1P53597 346 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 SRSF6Q13247 344 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 DDI2Q5TDH0 399 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 CARD17Q5XLA6 110 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 KRT77Q7Z794 578 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 NR2C2APQ86WQ0 139 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 LAX1Q8IWV1 398 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR10H5Q8NGA6 315 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 HAS2Q92819 552 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 RIF1Q5UIP0 2472 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A1B0GVG6 124 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 A6NL46 340 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF879B4DU55 563 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 LOC110117498-PIK3R3F6TDL0 507 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF254O75437 659 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF432O94892 652 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 PRKAR1AP10644 381 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 CD46P15529 392 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 STARP49675 285 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF133P52736 654 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 RIDAP52758 137 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 DEGS2Q6QHC5 323 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 DCXRQ7Z4W1 244 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 PRSS35Q8N3Z0 413 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR10D3Q8NH80 312 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ACOT12Q8WYK0 555 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 TMEM54Q969K7 222 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 KCTD12Q96CX2 325 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 C4orf45Q96LM5 186 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF385AQ96PM9 386 aaKnown RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 OR2M2Q96R28 347 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 MIXL1Q9H2W2 232 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ZNF552Q9H707 407 aaPredicted RBP10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ABCB9Q9NP78 766 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 GLTPQ9NZD2 209 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 CYB5R1Q9UHQ9 305 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 LRP12Q9Y561 859 aa10.17□□□□□ -0.78
SMARCAL1-203ENST00000392128 ARPC4-TTLL3A0A0A6YYG9 625 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 TRBV5-5A0A0J9YX44 114 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 A0A1W2PPL8 197 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 WNT11O96014 354 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 QDPRP09417 244 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 MEOX1P50221 254 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 CLDN15P56746 228 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 PPP3R1P63098 170 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 IFITM3Q01628 133 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 KCNMB1Q16558 191 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 HSD17B12Q53GQ0 312 aa10.16□□□□□ -0.78
SMARCAL1-203ENST00000392128 C10orf128Q5T292 105 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms