RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 LGR4Q9BXB1 951 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 AICDAQ9GZX7 198 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 CSAG2Q9Y5P2 127 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 F5P12259 2224 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 LRRK1Q38SD2 2015 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 A0A1W2PR48 441 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 TMEM72A0PK05 275 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 ALOX12BO75342 701 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 FBXO24O75426 580 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 HIST1H1CP16403 213 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 LPAR6P43657 344 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 PCP4P48539 62 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 MITD1Q8WV92 249 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 DCUN1D4Q92564 292 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 KIRREL1Q96J84 757 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 Q96M85 177 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 MOGAT1Q96PD6 335 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 GAS2L1Q99501 681 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 RNF126Q9BV68 326 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 GPR174Q9BXC1 333 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 USP36Q9P275 1121 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 USP34Q70CQ2 3546 aa13.28□□□□□ -0.28
VPS9D1-201ENST00000389386 EEF1E1-BLOC1S5C9J1V9 151 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 YIF1AO95070 293 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 CRHP06850 196 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 NME2P22392 152 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 CASP6P55212 293 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 RNF4P78317 190 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 REEP5Q00765 189 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 FHL1Q13642 323 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 SSX2Q16385 188 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF684Q5T5D7 378 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 SLC16A11Q8NCK7 471 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 ADAMTS17Q8TE56 1095 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 ADAMTS15Q8TE58 950 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 IP6K3Q96PC2 410 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 OR2AG1Q9H205 316 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 VSIG4Q9Y279 399 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 KPTNQ9Y664 436 aa13.27□□□□□ -0.28
VPS9D1-201ENST00000389386 TRBV5-5A0A0J9YX44 114 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 OR1F1O43749 312 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 DCNP07585 359 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 SNRNP70P08621 437 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 CISD3P0C7P0 127 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 CD1CP29017 333 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC6A6P31641 620 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 GSK3AP49840 483 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 PPP1R1AQ13522 171 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 AWAT1Q58HT5 328 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 TRAPPC5Q8IUR0 188 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 CHST5Q9GZS9 411 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 CHMP1AQ9HD42 196 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 WDR45Q9Y484 360 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 ATG4BQ9Y4P1 393 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 WIF1Q9Y5W5 379 aa13.27□□□□□ -0.29
VPS9D1-201ENST00000389386 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 URADA6NGE7 173 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 AGPAT2O15120 278 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 IL2RAP01589 272 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CSNK2A2P19784 350 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC6A9P48067 706 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SNRPNP63162 240 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 FAM24BQ8N5W8 94 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 KDF1Q8NAX2 398 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CDS1Q92903 461 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CCDC74AQ96AQ1 378 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC6A7Q99884 636 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CST11Q9H112 138 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 KCNK15Q9H427 330 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 EPHX3Q9H6B9 360 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CHRNA9Q9UGM1 479 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 MSRAQ9UJ68 235 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 LOC390937A0A1W2PQ73 354 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 LINC01565O15544 149 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 SPINT1O43278 529 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 DAOP14920 347 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 MAOAP21397 527 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CDX1P47902 265 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 BPIFB3P59826 476 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ACY1Q03154 408 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 HMGN3Q15651 99 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 EIPR1Q53HC9 387 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 CYB5R2Q6BCY4 276 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 BPIFB2Q8N4F0 458 aa13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 ZSCAN4Q8NAM6 433 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-201ENST00000389386 OR5AR1Q8NGP9 310 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms