RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CRYBB2P43320 205 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 KIR3DL2P43630 455 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 CX3CR1P49238 355 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 CDH4P55283 916 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 POLR2FP61218 127 aaKnown RBP1□□□□□ -2.25
RNU6-541P-201ENST00000384709 FGL1Q08830 312 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 RABL6Q3YEC7 729 aaPredicted RBP1□□□□□ -2.25
RNU6-541P-201ENST00000384709 FAM78AQ5JUQ0 283 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 ARL9Q6T311 187 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 TEX9Q8N6V9 391 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 HSD17B11Q8NBQ5 300 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR52M1Q8NGK5 317 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR8U1Q8NH10 309 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 COQ8AQ8NI60 647 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 FAM3DQ96BQ1 224 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 TM4SF18Q96CE8 201 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 RBMXL1Q96E39 390 aaKnown RBP1□□□□□ -2.25
RNU6-541P-201ENST00000384709 NEURL3Q96EH8 262 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 GALNT14Q96FL9 552 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 PLEKHA8Q96JA3 519 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 TTC25Q96NG3 672 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 RPRD1AQ96P16 312 aaPredicted RBP1□□□□□ -2.25
RNU6-541P-201ENST00000384709 CAMK2N2Q96S95 79 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC39A3Q9BRY0 314 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC25A2Q9BXI2 301 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 ETNK2Q9NVF9 386 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 PIGLQ9Y2B2 252 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 MUC6Q6W4X9 2439 aa1□□□□□ -2.25
RNU6-541P-201ENST00000384709 COL11A1P12107 1806 aaPredicted RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 C15orf38-AP3S2A0A0A6YYH1 394 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 IGHV1OR15-9A0A0B4J2B8 117 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SOX15O60248 233 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CDRT1O95170 752 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CT62P0C5K7 136 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 ATP1B2P14415 290 aaPredicted RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 RAB3BP20337 219 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 KITLGP21583 273 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC2A5P22732 501 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CEACAM6P40199 344 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CDKN1BP46527 198 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CEBPDP49716 269 aaPredicted RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SSR4P51571 173 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PRRX1P54821 245 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 KRTAP12-3P60328 96 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 TCP10Q12799 353 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SRSF5Q13243 272 aaKnown RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 MAB21L1Q13394 359 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC39A6Q13433 755 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 GPM6BQ13491 265 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 GK3PQ14409 553 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PHYHD1Q5SRE7 291 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 AVPI1Q5T686 147 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR2A2Q6IF42 318 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PRMT9Q6P2P2 845 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 LRRC74BQ6ZQY2 392 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 NCCRP1Q6ZVX7 275 aaPredicted RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CALHM3Q86XJ0 350 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 ZNF547Q8IVP9 402 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 LGI3Q8N145 548 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 ST20-AS1Q8NBB2 130 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR4F6Q8NGB9 312 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR4K5Q8NGD3 323 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR1L4Q8NGR5 311 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 LINC01560Q8TB33 94 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CIRBP-AS1Q8TBR5 109 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 RTN4IP1Q8WWV3 396 aaPredicted RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PIBF1Q8WXW3 757 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 STMN2Q93045 179 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 C12orf42Q96LP6 360 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 ZNF382Q96SR6 550 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 TIMM29Q9BSF4 260 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PLA2G12AQ9BZM1 189 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CWH43Q9H720 699 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 NT5MQ9NPB1 228 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 CGNQ9P2M7 1197 aaKnown RBP0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SH3BGRL2Q9UJC5 107 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 SNX6Q9UNH7 406 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 PLXNA3P51805 1871 aa0.99□□□□□ -2.25
RNU6-541P-201ENST00000384709 TRAV6A0A075B6T7 132 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 IGKV3D-11A0A0A0MRZ8 115 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 PCP4L1A6NKN8 68 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR52A4PA6NMU1 304 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 K7EM74 188 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 HAS3O00219 553 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 CHST1O43916 411 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 ERLIN2O94905 339 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 AIFM1O95831 613 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 GUCA1CO95843 209 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 OR56A5P0C7T3 313 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 ETS2P15036 469 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 GLRA2P23416 452 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC11A1P49279 550 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 NUTF2P61970 127 aaKnown RBP0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 MXD1Q05195 221 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 CLINT1Q14677 625 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 TAF7Q15545 349 aaPredicted RBP0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 THEM4Q5T1C6 240 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 GALNT17Q6IS24 598 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 UQCC3Q6UW78 93 aa0.98□□□□□ -2.25
RNU6-541P-201ENST00000384709 SLC16A13Q7RTY0 426 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms