RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 MYOTQ9UBF9 498 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 OR5V1Q9UGF6 321 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 NXT1Q9UKK6 140 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 RBMX2Q9Y388 322 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 CPAMD8Q8IZJ3 1885 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 A0A1W2PNU3 283 aaPredicted RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 PMS2P1A4D2B8 440 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 TTLL8A6PVC2 850 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 NPIPA5E9PKD4 350 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MS4A18H0YCH9 400 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 TCRBP04435 133 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 SPARCP09486 303 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 FGF5P12034 268 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ADRA2CP18825 462 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 SPINK2P20155 84 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 RPS27P42677 84 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 RIDAP52758 137 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ART1P52961 327 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 IL11RAQ14626 422 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 SF3B4Q15427 424 aaKnown RBP eCLIP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MS4A18Q3C1V0 323 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 OR5M10Q6IEU7 315 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 LINGO2Q7L985 606 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 DND1Q8IYX4 353 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ACTR6Q9GZN1 396 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 WDR54Q9H977 334 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 GALNT9Q9HCQ5 603 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 CHST11Q9NPF2 352 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MED11Q9P086 117 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 NPIPA1Q9UND3 350 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 EXPH5Q8NEV8 1989 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 GDNFP39905 211 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 ZNF41P51814 821 aaPredicted RBP19.31■□□□□ 0.68
TRIM54-202ENST00000380075 FOXF1Q12946 379 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 MAB21L1Q13394 359 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 SNTB2Q13425 540 aaKnown RBP19.31■□□□□ 0.68
TRIM54-202ENST00000380075 OR7A5Q15622 319 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 MRPL14Q6P1L8 145 aaKnown RBP19.31■□□□□ 0.68
TRIM54-202ENST00000380075 LRRC69Q6ZNQ3 347 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 KRT77Q7Z794 578 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 ZNF227Q86WZ6 799 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 SYNPRQ8TBG9 265 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 SCMH1Q96GD3 660 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 LIN37Q96GY3 246 aaPredicted RBP19.31■□□□□ 0.68
TRIM54-202ENST00000380075 OCIAD1Q9NX40 245 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 ALKBH4Q9NXW9 302 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 KLHL9Q9P2J3 617 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 KLK13Q9UKR3 277 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 WASF3Q9UPY6 502 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 B3GALT5Q9Y2C3 310 aa19.31■□□□□ 0.68
TRIM54-202ENST00000380075 KNTC1P50748 2209 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 A0A087WV48 116 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 NAP1L6A6NFF2 107 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 MEN1O00255 615 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 C1QBP02746 253 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 CCL4P13236 92 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 MELKQ14680 651 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 LYPD8Q6UX82 237 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 RAB11FIP2Q7L804 512 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 AGBL5Q8NDL9 886 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 OR52N5Q8NH56 324 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 CMKLR1Q99788 373 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 CACNG6Q9BXT2 260 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 NUDT15Q9NV35 164 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 MCUBQ9NWR8 336 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 FOXJ3Q9UPW0 622 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 A0A1B0GTH9 108 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 FBXO45P0C2W1 286 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 GSTT2P0CG29 244 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 GSTT2BP0CG30 244 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 PTGS2P35354 604 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 TLE3Q04726 772 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 EIF2B1Q14232 305 aaKnown RBP19.3■□□□□ 0.68
TRIM54-202ENST00000380075 SLC35D2Q76EJ3 337 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 TSEN15Q8WW01 171 aaKnown RBP19.3■□□□□ 0.68
TRIM54-202ENST00000380075 ARL5BQ96KC2 179 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 OR2M2Q96R28 347 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 MESP1Q9BRJ9 268 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 BEX2Q9BXY8 128 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 SERINC1Q9NRX5 453 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 STEAP1Q9UHE8 339 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 ING1Q9UK53 422 aaPredicted RBP19.3■□□□□ 0.68
TRIM54-202ENST00000380075 LOXL2Q9Y4K0 774 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 WIF1Q9Y5W5 379 aa19.3■□□□□ 0.68
TRIM54-202ENST00000380075 A0A1W2PNV4 684 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 KRT33AO76009 404 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 ADRB1P08588 477 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 PCK2Q16822 640 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 TMEM69Q5SWH9 247 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 ARSKQ6UWY0 536 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 BTN2A1Q7KYR7 527 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 KCNK17Q96T54 332 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 ABHD6Q9BV23 337 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 SCNM1Q9BWG6 230 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 METTL7AQ9H8H3 244 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 VDAC3Q9Y277 283 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 COA3Q9Y2R0 106 aaPredicted RBP19.29■□□□□ 0.68
TRIM54-202ENST00000380075 B3GALT1Q9Y5Z6 326 aa19.29■□□□□ 0.68
TRIM54-202ENST00000380075 CCDC187A0A096LP49 1063 aa19.28■□□□□ 0.68
TRIM54-202ENST00000380075 C2orf72A6NCS6 295 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms