RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CLDN12P56749 244 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 TEKQ02763 1124 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 OR7A5Q15622 319 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 WDR74Q6RFH5 385 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 PLCZ1Q86YW0 608 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 WDR76Q9H967 626 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 FGF20Q9NP95 211 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 KLF2Q9Y5W3 355 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 IGKV3D-11A0A0A0MRZ8 115 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 LY6G6EA0A0G2JKS1 128 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 FRG2CA6NGY1 282 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 MARCH11A6NNE9 402 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 I3L521 148 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 SPI1P17947 270 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 GABRA5P31644 462 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 UGT2B10P36537 528 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 BTN1A1Q13410 526 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 P2RY14Q15391 338 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 HFEQ30201 348 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 RHBDD2Q6NTF9 364 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 ASB18Q6ZVZ8 466 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 GLCCI1Q86VQ1 547 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 CATSPERDQ86XM0 798 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 IZUMO1Q8IYV9 350 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 OR14A16Q8NHC5 309 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 WFDC12Q8WWY7 111 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 NEDD4LQ96PU5 975 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 OR14A2Q96R54 314 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 KCNJ15Q99712 375 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 ALG12Q9BV10 488 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 PCED1AQ9H1Q7 454 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 MMP25Q9NPA2 562 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 PCDHB10Q9UN67 800 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 AK6Q9Y3D8 172 aaKnown RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 CMAHPQ9Y471 501 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 U3KQA8 63 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 A4D1N5 150 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 XKRYO14609 159 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 PSKH1P11801 424 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 KIR3DL2P43630 455 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 INPP1P49441 399 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 CTBP2P56545 445 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 SLAQ13239 276 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 FHL1Q13642 323 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF74Q16587 644 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 DMRTC1Q5HYR2 192 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 EXOSC6Q5RKV6 272 aaKnown RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 CARD17Q5XLA6 110 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 SULF2Q8IWU5 870 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 SLC35F2Q8IXU6 374 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 NANOS1Q8WY41 292 aaKnown RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 CNN2Q99439 309 aaKnown RBP9.76□□□□□ -0.85
NEDD9-201ENST00000379433 DEFB126Q9BYW3 111 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 SLC19A3Q9BZV2 496 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 MMP28Q9H239 520 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 MED29Q9NX70 200 aa9.76□□□□□ -0.85
NEDD9-201ENST00000379433 C5orf51A6NDU8 294 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 MFSD2BA6NFX1 497 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 GATBO75879 557 aaKnown RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 CCKBRP32239 447 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ZXDAP98168 799 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF85Q03923 595 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 DDI2Q5TDH0 399 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ATG4DQ86TL0 474 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 SAMD12Q8N8I0 201 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ASB15Q8WXK1 588 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 NSMAFQ92636 917 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 SLC25A46Q96AG3 418 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 MVB12AQ96EY5 273 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ZFP3Q96NJ6 502 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 CITED1Q99966 193 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 CHRNA9Q9UGM1 479 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 PCDHGA5Q9Y5G8 931 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 DSPP15924 2871 aaKnown RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 EML6Q6ZMW3 1958 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF407Q9C0G0 2248 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 MN1Q10571 1320 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 TMED7-TICAM2A0A0A6YYA0 188 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 A0A0U1RQV5 110 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 A0A1W2PNR3 127 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 CCDC182A6NF36 153 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 MPZL1O95297 269 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 GP1BAP07359 652 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 FBXO45P0C2W1 286 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 TMIGD3P0DMS9 266 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 OTX2P32243 289 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 LUMP51884 338 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ACSM3Q53FZ2 586 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 TMEM91Q6ZNR0 172 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 FAM122BQ7Z309 247 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 NRARPQ7Z6K4 114 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 YIPF7Q8N8F6 280 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 TMEM105Q8N8V8 129 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 APCDD1LQ8NCL9 501 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 NPEPL1Q8NDH3 523 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF417Q8TAU3 575 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 PPP1R14AQ96A00 147 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms