RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TMEM244Q5VVB8 128 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 TRILQ7L0X0 811 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 GALNT16Q8N428 558 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 L3MBTL4Q8NA19 623 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 OR5D14Q8NGL3 314 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 BPIFA2Q96DR5 249 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 ZNF582Q96NG8 517 aaPredicted RBP9.9□□□□□ -0.82
HIF3A-205ENST00000377670 NIPAL2Q9H841 368 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
HIF3A-205ENST00000377670 ACOT8O14734 319 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 CLDN15P56746 228 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 CLDN12P56749 244 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 OR8G1Q15617 311 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 DUSP7Q16829 419 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 AGBL4Q5VU57 503 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 LILRA6Q6PI73 481 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 TBPL2Q6SJ96 375 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF705AQ6ZN79 300 aaPredicted RBP9.9□□□□□ -0.83
HIF3A-205ENST00000377670 SULF2Q8IWU5 870 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 FAM173AQ9BQD7 235 aa9.9□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF346Q9UL40 294 aaKnown RBP9.9□□□□□ -0.83
HIF3A-205ENST00000377670 CROCCQ5TZA2 2017 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 ZNF732B4DXR9 585 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TCRBP04435 133 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 DEFA4P12838 97 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 PTGER4P35408 488 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TNK1Q13470 666 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 OR1Q1Q15612 314 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 PLK5Q496M5 336 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CISD2Q8N5K1 135 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 SLC38A5Q8WUX1 472 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 INTS12Q96CB8 462 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 KIAA1456Q9P272 454 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TMEM82A0PJX8 343 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 PLPP1O14494 284 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 P2RX6O15547 441 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MT-CO2P00403 227 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 FURINP09958 794 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CLEC2LP0C7M8 214 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 FTH1P19P0C7X4 201 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 GNB3P16520 340 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 PSMB1P20618 241 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 SPOCK1Q08629 439 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 EBPQ15125 230 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 ENTPD8Q5MY95 495 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NRTNQ99748 197 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NARFLQ9H6Q4 476 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 GCM1Q9NP62 436 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 FBXL4Q9UKA2 621 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 OR2J2O76002 312 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 PIGAP37287 484 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 LIPAP38571 399 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MFAP5Q13361 173 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 SIAH3Q8IW03 269 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 BAHD1Q8TBE0 780 aaPredicted RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 C2CD4CQ8TF44 421 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 EID2BQ96D98 161 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 RSPRY1Q96DX4 576 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 LURAP1Q96LR2 239 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MS4A8Q9BY19 250 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 LYRM4Q9HD34 91 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 ACSS1Q9NUB1 689 aaPredicted RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NDRG4Q9ULP0 352 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 KLK4Q9Y5K2 254 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CORINQ9Y5Q5 1042 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 FZD6O60353 706 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MEOX1P50221 254 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NXPH1P58417 271 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 SLC14A1Q13336 389 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 EDDM3AQ14507 147 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 WDR5BQ86VZ2 330 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TM4SF18Q96CE8 201 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 FYTTD1Q96QD9 318 aaKnown RBP9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TMEM43Q9BTV4 400 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 UTRNP46939 3433 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 SPTBN2O15020 2390 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 OR2W5A6NFC9 320 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 AIPO00170 330 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MASP2O00187 686 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CCL21O00585 134 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 TPPPO94811 219 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CX3CR1P49238 355 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 IKZF1Q13422 519 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 CLVS2Q5SYC1 327 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 MED20Q9H944 212 aa9.89□□□□□ -0.83
HIF3A-205ENST00000377670 BHLHE40O14503 412 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 CLEC3BP05452 202 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 RAB40ALP0C0E4 278 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 RNF4P78317 190 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 PLA2G7Q13093 441 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 IDO2Q6ZQW0 420 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 MAML2Q8IZL2 1156 aaPredicted RBP9.88□□□□□ -0.83
HIF3A-205ENST00000377670 KDM8Q8N371 416 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 DEFB108BQ8NET1 73 aa9.88□□□□□ -0.83
HIF3A-205ENST00000377670 LGALS14Q8TCE9 139 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms