RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 STEAP1BQ6NZ63 245 aa16.33■□□□□ 0.2
SF1-203ENST00000377387 JAGN1Q8N5M9 183 aa16.33■□□□□ 0.2
SF1-203ENST00000377387 LIPHQ8WWY8 451 aa16.33■□□□□ 0.2
SF1-203ENST00000377387 ZNF578Q96N58 590 aaPredicted RBP16.33■□□□□ 0.2
SF1-203ENST00000377387 OR8B4Q96RC9 309 aa16.33■□□□□ 0.2
SF1-203ENST00000377387 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
SF1-203ENST00000377387 TTYH1Q9H313 450 aaPredicted RBP16.33■□□□□ 0.2
SF1-203ENST00000377387 hCG_1807616A0A1W2PRN6 198 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 EIF1AYO14602 144 aaKnown RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 BGLAPP02818 100 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 CSF1P09603 554 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 M6PRP20645 277 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 IL11P20809 199 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 C4BPBP20851 252 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 SCGB2B2Q4G0G5 96 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 LINC00346Q8IVM7 164 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 GPR119Q8TDV5 335 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 SLC46A1Q96NT5 459 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 TINAGL1Q9GZM7 467 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 MS4A7Q9GZW8 240 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 ADAM19Q9H013 955 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 POFUT1Q9H488 388 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 SPAG17Q6Q759 2223 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 PRSS37A4D1T9 235 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 SOX1O00570 391 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 NUPL2O15504 423 aaKnown RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 LMX1BO60663 402 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 RP2O75695 350 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 ZNF432O94892 652 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 NSDHLQ15738 373 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 EMC4Q5J8M3 183 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 THAP3Q8WTV1 239 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 C15orf40Q8WUR7 153 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 CUTCQ9NTM9 273 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 ZNF230Q9UIE0 474 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 FBXO4Q9UKT5 387 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 COA3Q9Y2R0 106 aaPredicted RBP16.32■□□□□ 0.2
SF1-203ENST00000377387 LPLP06858 475 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 GP1BBP13224 206 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 PLCXD2Q0VAA5 305 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 BTN1A1Q13410 526 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 LRRC37A5PQ49AS3 106 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 ZNF679Q8IYX0 411 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 PTDSS2Q9BVG9 487 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 LAT2Q9GZY6 243 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 EMC9Q9Y3B6 208 aa16.32■□□□□ 0.2
SF1-203ENST00000377387 ARID1AO14497 2285 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 LOC100289279A0A1B0GTE1 492 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 FITM1A5D6W6 292 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 IGF2P01344 180 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 MYF5P13349 255 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ATF4P18848 351 aaPredicted RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 GABRA4P48169 554 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 NKPD1Q17RQ9 610 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 TUSC1Q2TAM9 212 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 SLC18B1Q6NT16 456 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 MAMDC2Q7Z304 686 aaPredicted RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 GALNT16Q8N428 558 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ADIPOR1Q96A54 375 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 MARVELD3Q96A59 401 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 PNPLA2Q96AD5 504 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 SLC25A44Q96H78 314 aaPredicted RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 DMRTA2Q96SC8 542 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 NPAS1Q99742 590 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ABHD6Q9BV23 337 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 B3GNT4Q9C0J1 378 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ATXN7L1Q9ULK2 861 aaPredicted RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 MRPS18BQ9Y676 258 aaKnown RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 TRAV36DV7A0A075B6V5 113 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 IGHV3-20A0A0C4DH32 117 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 A0A1W2PPC4 97 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ALOX12BO75342 701 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 ZNF28P17035 718 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 FMODQ06828 376 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 TMEM225Q6GV28 225 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 CORO6Q6QEF8 472 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 C9orf40Q8IXQ3 194 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 GABRG1Q8N1C3 465 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 RELL2Q8NC24 303 aaPredicted RBP16.31■□□□□ 0.2
SF1-203ENST00000377387 ZNF721Q8TF20 911 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 APMAPQ9HDC9 416 aa16.31■□□□□ 0.2
SF1-203ENST00000377387 TMED7-TICAM2A0A0A6YYA0 188 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 SLC17A2O00624 439 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 SIGLEC5O15389 551 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 RAB3DO95716 219 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 DDAH2O95865 285 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 AMY2AP04746 511 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 NMBP08949 121 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 EIF1AXP47813 144 aaKnown RBP16.3■□□□□ 0.2
SF1-203ENST00000377387 EPHA4P54764 986 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 SIGLEC14Q08ET2 396 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 SMAD2Q15796 467 aaKnown RBP16.3■□□□□ 0.2
SF1-203ENST00000377387 ADGRG3Q86Y34 549 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 OR4S1Q8NGB4 309 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 ASB5Q8WWX0 329 aa16.3■□□□□ 0.2
SF1-203ENST00000377387 ZNF587Q96SQ5 575 aaPredicted RBP16.3■□□□□ 0.2
SF1-203ENST00000377387 MESP1Q9BRJ9 268 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms