RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ASH2LQ9UBL3 628 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 RAB22AQ9UL26 194 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 LILRA5A6NI73 299 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 BSGP35613 385 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 GDNFP39905 211 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 MRPL19P49406 292 aaKnown RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 FAM53BQ14153 422 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ACKR1Q16570 336 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 OR5M9Q8NGP3 310 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 LINC00615Q96LM1 132 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 GPR78Q96P69 363 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PAPLNO95428 1278 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 EMDP50402 254 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 HCCSP53701 268 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 FAM185AQ8N0U4 392 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 KCTD12Q96CX2 325 aaKnown RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 BANF2Q9H503 90 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 GNB1P62873 340 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 THEM4Q5T1C6 240 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 OR51E1Q8TCB6 317 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ST8SIA1Q92185 356 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 SLAMF6Q96DU3 332 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 IER2Q9BTL4 223 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 CLEC1BQ9P126 229 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 OR2W5A6NFC9 320 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 FRG2CA6NGY1 282 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 MT-CO3P00414 261 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 CALCBP10092 127 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 IL9P15248 144 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 SRMP19623 302 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 SORDQ00796 357 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 LAX1Q8IWV1 398 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 DVL3Q92997 716 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 C3orf49Q96BT1 292 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 OR5M11Q96RB7 305 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 CDX2Q99626 313 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 KCNJ16Q9NPI9 418 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PTTG3PQ9NZH4 202 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PRRC2BQ5JSZ5 2229 aaKnown RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 IHHQ14623 411 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 EGFL6Q8IUX8 553 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SUMF2Q8NBJ7 301 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OR51D1Q8NGF3 324 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 ROBO4Q8WZ75 1007 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OXGR1Q96P68 337 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 K7EPK0 472 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 M0QYG6 137 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 GALEQ14376 348 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OVCH1Q7RTY7 1134 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 FAM71E2Q8N5Q1 922 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.43□□□□□ -0.42
GPC6-201ENST00000377047 CTSFQ9UBX1 484 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 COL22A1Q8NFW1 1626 aaPredicted RBP12.43□□□□□ -0.42
GPC6-201ENST00000377047 MED6O75586 246 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 RAB4AP20338 218 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SDHAP31040 664 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 TAS2R30P59541 319 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 CLN3Q13286 438 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 HTR4Q13639 388 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 USP51Q70EK9 711 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SLC35G3Q8N808 338 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 C1QTNF3Q9BXJ4 246 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 AKAP11Q9UKA4 1901 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
GPC6-201ENST00000377047 PHLDA2Q53GA4 152 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 DLEU7Q6UYE1 221 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OR2A1Q8NGT9 310 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SMOC1Q9H4F8 434 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 ACOXLQ9NUZ1 547 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SOD1P00441 154 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 UBBP0CG47 229 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 PIPP12273 146 aaPredicted RBP12.43□□□□□ -0.42
GPC6-201ENST00000377047 NME1P15531 152 aaKnown RBP12.43□□□□□ -0.42
GPC6-201ENST00000377047 SCGB2A2Q13296 93 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 FCRL6Q6DN72 434 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 ZNF546Q86UE3 836 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OR6M1Q8NGM8 313 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 FBXO24O75426 580 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 APOA2P02652 100 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 BCKDHBP21953 392 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 OR1C1Q15619 314 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 CYHR1Q6ZMK1 362 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
GPC6-201ENST00000377047 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 TAS2R4Q9NYW5 299 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 CLEC2DQ9UHP7 191 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
GPC6-201ENST00000377047 A0A087WV62 115 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 ANXA7P20073 488 aaKnown RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 GSK3AP49840 483 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 RBP2P50120 134 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms