RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RPUSD3Q6P087 351 aaKnown RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 SYT14Q8NB59 555 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 WDFY2Q96P53 400 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 UCN2Q96RP3 112 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 ABHD6Q9BV23 337 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 TMED9Q9BVK6 235 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 NIPAL2Q9H841 368 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 EXOSC4Q9NPD3 245 aaKnown RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 B3GNT3Q9Y2A9 372 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 TRBV2A0A0J9YWF9 115 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 TRBV5-5A0A0J9YX44 114 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 A6NL46 340 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 CXCL13O43927 109 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 HLA-DQA2P01906 255 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 TCEA1P23193 301 aaKnown RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 CTSSP25774 331 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 CSNK1A1P48729 337 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 FMODQ06828 376 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 CAMK2DQ13557 499 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ZNF846Q147U1 533 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 INAQ16352 499 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 DEFB109BQ30KR1 87 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 FCRLAQ7L513 359 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 YIPF7Q8N8F6 280 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ZFP41Q8N8Y5 198 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 C11orf40Q8WZ69 217 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 AP3S1Q92572 193 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 EMC6Q9BV81 110 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 MROQ9BYG7 248 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 BCO1Q9HAY6 547 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 HMG20AQ9NP66 347 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 GALNT8Q9NY28 637 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ING1Q9UK53 422 aaPredicted RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 KNTC1P50748 2209 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ACOD1A6NK06 481 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 SLC43A1O75387 559 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ARL6IP5O75915 188 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 F10P00742 488 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 RAF1P04049 648 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 QDPRP09417 244 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 KLK2P20151 261 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 EDNRAP25101 427 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 OPRL1P41146 370 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 BMXP51813 675 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 DBPQ10586 325 aaPredicted RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 DCTN2Q13561 401 aaKnown RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 EIF2B1Q14232 305 aaKnown RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 RNPS1Q15287 305 aaKnown RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 ARL9Q6T311 187 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 THEM6Q8WUY1 208 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 TMEM203Q969S6 136 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 KCTD12Q96CX2 325 aaKnown RBP9.86□□□□□ -0.83
PDPN-202ENST00000376057 BARHL1Q9BZE3 327 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 POLE4Q9NR33 117 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 SLCO1C1Q9NYB5 712 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 ZNF175Q9Y473 711 aa9.86□□□□□ -0.83
PDPN-202ENST00000376057 OR4C45A6NMZ5 311 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 ISG15P05161 165 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 NPR2P20594 1047 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 MAPK3P27361 379 aaPredicted RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 MRPS34P82930 218 aaKnown RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 ACSM3Q53FZ2 586 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 OR2G2Q8NGZ5 317 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CPT1CQ8TCG5 803 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 ACOT12Q8WYK0 555 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 ZNF385AQ96PM9 386 aaKnown RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 HDHD5Q9BXW7 423 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 B3GAT2Q9NPZ5 323 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 FRRS1LQ9P0K9 344 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 PLEKHB1Q9UF11 243 aaPredicted RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 RPL36A-HNRNPH2H7BZ11 118 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CDRT1O95170 752 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CELA3AP09093 270 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 SPARCP09486 303 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CD8BP10966 210 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 STARP49675 285 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 MMP16P51512 607 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 RIDAP52758 137 aaKnown RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 NANOS3P60323 173 aaKnown RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 ZNF45Q02386 682 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 MEP1BQ16820 701 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 ZMAT1Q5H9K5 638 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 CATSPERDQ86XM0 798 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 MFSD4AQ8N468 514 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 ZADH2Q8N4Q0 377 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 OR10H5Q8NGA6 315 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 DCLRE1CQ96SD1 692 aaKnown RBP9.85□□□□□ -0.83
PDPN-202ENST00000376057 PRDM14Q9GZV8 571 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 NELFAQ9H3P2 528 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 C1orf198Q9H425 327 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 PARPBPQ9NWS1 579 aa9.85□□□□□ -0.83
PDPN-202ENST00000376057 MCTS1Q9ULC4 181 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms