RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GGTA1PQ4G0N0 100 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 XAF1Q6GPH4 301 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 TPRG1Q6ZUI0 275 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 MRGPRX2Q96LB1 330 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 SLC17A9Q9BYT1 436 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 RAB6CQ9H0N0 254 aa6.1□□□□□ -1.43
UBR4-204ENST00000375254 VSTM2BA6NLU5 285 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 VEGFDO43915 354 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MPC2O95563 127 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 HAPLN1P10915 354 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 SLC6A11P48066 632 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 TAZQ16635 292 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 KIAA0895LQ68EN5 471 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 UBTD2Q8WUN7 234 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 IL22RA2Q969J5 263 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 NSUN5Q96P11 429 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 CITED2Q99967 270 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 CDH20Q9HBT6 801 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 LOC102725191A0A1B0GVB3 256 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 A0A1W2PN81 502 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CORTO00230 105 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CHRNA7P36544 502 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 NHLH1Q02575 133 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.09□□□□□ -1.43
UBR4-204ENST00000375254 HFEQ30201 348 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CYHR1Q6ZMK1 362 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 TSEN54Q7Z6J9 526 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 UBALD1Q8TB05 177 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 SMIM19Q96E16 107 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 C2orf88Q9BSF0 95 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 GPR174Q9BXC1 333 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ASCL3Q9NQ33 180 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 SEC11BP0C7V7 166 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 EGR3Q06889 387 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 SURF2Q15527 256 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZNF687Q8N1G0 1237 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MARCH5Q9NX47 278 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 TRBV9A0A0B4J1U6 114 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 A8MXK9 166 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 LMX1BO60663 402 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 DBHP09172 617 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 RAB38P57729 211 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 EVX2Q03828 476 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CNN3Q15417 329 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 SMN1Q16637 294 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 TMEM151BQ8IW70 566 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 UMODL1-AS1Q8N2C9 162 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CDRT4Q8N9R6 151 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 LGALS14Q8TCE9 139 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 C12orf42Q96LP6 360 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 FAM103A1Q9BTL3 118 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 MANBALQ9NQG1 85 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MSRAQ9UJ68 235 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 FLVCR1Q9Y5Y0 555 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 EDDM13A0A1B0GTR0 161 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CASTOR2A6NHX0 329 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 NHLRC3Q5JS37 347 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ARHGEF39Q8N4T4 335 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ESAMQ96AP7 390 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZNF689Q96CS4 500 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 OR2M5A3KFT3 312 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 LMAN2Q12907 356 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 PLGLAQ15195 96 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MPV17LQ2QL34 196 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 CATSPERDQ86XM0 798 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MAML2Q8IZL2 1156 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 UBXN10Q96LJ8 280 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 RCC2Q9P258 522 aaKnown RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 SEMA4FO95754 770 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 COX6CP09669 75 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 PIGAP37287 484 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZNF626Q68DY1 528 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 KCND3Q9UK17 655 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZMIZ1Q9ULJ6 1067 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MAN2B1O00754 1011 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ENTPD8Q5MY95 495 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 SERINC5Q86VE9 423 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 H3BQ15 152 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 NDUFS4O43181 175 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 AKR7A3O95154 331 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ENPP1P22413 925 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 NCMAPQ5T1S8 102 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 FOXJ2Q9P0K8 574 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 MTFP1Q9UDX5 166 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZNF749O43361 778 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 ZNF93P35789 620 aaPredicted RBP6.09□□□□□ -1.43
UBR4-204ENST00000375254 LILRA4P59901 499 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 PELI3Q8N2H9 469 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 FZD8Q9H461 694 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
UBR4-204ENST00000375254 TEX29Q8N6K0 151 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 ARID1AO14497 2285 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 A0A1B0GV90 55 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 INHBBP09529 407 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 WNT7BP56706 349 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 ZNF648Q5T619 568 aaPredicted RBP6.09□□□□□ -1.44
UBR4-204ENST00000375254 DLEU7Q6UYE1 221 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms