RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ECI1P42126 302 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 CDX1P47902 265 aaPredicted RBP7.15□□□□□ -1.26
USP48-203ENST00000374732 IL13RA1P78552 427 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 ARHGAP1Q07960 439 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 PJVKQ0ZLH3 352 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 CEACAM7Q14002 265 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 BATFQ16520 125 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 PAMR1Q6UXH9 720 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 IFNEQ86WN2 208 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 SIDT2Q8NBJ9 832 aaKnown RBP7.15□□□□□ -1.26
USP48-203ENST00000374732 OR10A6Q8NH74 314 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 TAAR8Q969N4 342 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 SLC25A28Q96A46 364 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 C1orf159Q96HA4 380 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 MMP28Q9H239 520 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 ABI3Q9P2A4 366 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 THAP10Q9P2Z0 257 aaPredicted RBP7.15□□□□□ -1.26
USP48-203ENST00000374732 ZNF337Q9Y3M9 751 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 PLXNA1Q9UIW2 1896 aa7.15□□□□□ -1.26
USP48-203ENST00000374732 A0A1W2PP55 124 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TRAPPC2LH3BP13 241 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 CTSVO60911 334 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TOX4O94842 621 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 F12P00748 615 aaPredicted RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 UGT2B7P16662 529 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 GLP1RP43220 463 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TFPI2P48307 235 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 NKX6-1P78426 367 aaPredicted RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 ZNF404Q494X3 552 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 FBLN7Q53RD9 439 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 OR2G6Q5TZ20 316 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 OR4F3Q6IEY1 312 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TMEM126BQ8IUX1 230 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 SYS1Q8N2H4 156 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 OR5R1Q8NH85 324 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 PPTC7Q8NI37 304 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 ORAOV1Q8WV07 137 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TFB1MQ8WVM0 346 aaKnown RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 TMEM239Q8WW34 195 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 CNOT9Q92600 299 aaKnown RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 MSI2Q96DH6 328 aaKnown RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 IL4I1Q96RQ9 567 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 LPAR4Q99677 370 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 KATNBL1Q9H079 304 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 CHST8Q9H2A9 424 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 ZMAT4Q9H898 229 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 TMEM161AQ9NX61 479 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 STOX2Q9P2F5 926 aaPredicted RBP7.15□□□□□ -1.27
USP48-203ENST00000374732 LGALS13Q9UHV8 139 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 ICAM5Q9UMF0 924 aa7.15□□□□□ -1.27
USP48-203ENST00000374732 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 YJEFN3A6XGL0 299 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CORTO00230 105 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 MPC2O95563 127 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 FABP3P05413 133 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 C1GALT1C1LP0DN25 315 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 GATA3P23771 443 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 MNDAP41218 407 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 HTR6P50406 440 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 S100A10P60903 97 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 UBXN2BQ14CS0 331 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 LRRC26Q2I0M4 334 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 PRRT3Q5FWE3 981 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 TMEM268Q5VZI3 342 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 FAHD1Q6P587 224 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 DNM1P34Q6PK57 102 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 DHRS11Q6UWP2 260 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CEACAM20Q6UY09 585 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 HACD2Q6Y1H2 254 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 B3GLCTQ6Y288 498 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 SAP25Q8TEE9 199 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 C10orf82Q8WW14 230 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 PIGCQ92535 297 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 ISOC2Q96AB3 205 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 ZFP3Q96NJ6 502 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CPXM1Q96SM3 734 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 MESP1Q9BRJ9 268 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 HDAC8Q9BY41 377 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 KCNK9Q9NPC2 374 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 GPR27Q9NS67 375 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 VNN3Q9NY84 501 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 LTBP2Q14767 1821 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 SMIM9A6NGZ8 99 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 ZNF726A6NNF4 738 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 J3KTA2 159 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 OR6A2O95222 327 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 TSPAN19P0C672 248 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 FCGR2AP12318 317 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 HOXA5P20719 270 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 SSTR1P30872 391 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CDKN2BP42772 138 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 HTR4Q13639 388 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CRMP1Q14194 572 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 PEA15Q15121 130 aa7.14□□□□□ -1.27
USP48-203ENST00000374732 CXorf66Q5JRM2 361 aaPredicted RBP7.14□□□□□ -1.27
USP48-203ENST00000374732 FFAR4Q5NUL3 377 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms