RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PKMYT1Q99640 499 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 OR11A1Q9GZK7 315 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 EIF4E2O60573 245 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 SLC2A10O95528 541 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 APOBEC1P41238 236 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 MAGEB1P43366 347 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 DLEU7Q6UYE1 221 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 RPS19BP1Q86WX3 136 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 NANOGP1Q8N7R0 232 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 ELSPBP1Q96BH3 223 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 EXOSC3Q9NQT5 275 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 NKAIN1Q4KMZ8 207 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 AFMIDQ63HM1 303 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 BOLA1Q9Y3E2 137 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 PMS2P2O95744 297 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 TMEM99Q8N816 258 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 OR51H1Q8NH63 302 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 OR52A5Q9H2C5 316 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 MYH9P35579 1960 aaKnown RBP20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 RGS11O94810 467 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 HSF1Q00613 529 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 OBP2AQ9NY56 170 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 OSGIN2Q9Y236 505 aa20.29■□□□□ 0.84
TM9SF3-201ENST00000371142 CNIH1O95406 144 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 ZNF266Q14584 549 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 CDONQ4KMG0 1287 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 CATSPERDQ86XM0 798 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 OR10J5Q8NHC4 309 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SLCO5A1Q9H2Y9 848 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 RNF167Q9H6Y7 350 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 UGT2A1Q9Y4X1 527 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 H7C1Q1 480 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 GABRA4P48169 554 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SLC35B4Q969S0 331 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 ZFP92A6NM28 416 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SYT14P1Q58G82 188 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 XKR7Q5GH72 579 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SYT6Q5T7P8 510 aaPredicted RBP20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 CORO6Q6QEF8 472 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 RSPO2Q6UXX9 243 aaPredicted RBP20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 ASIC5Q9NY37 505 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 CHRNA9Q9UGM1 479 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 DMWDQ09019 674 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 ADIRFQ15847 76 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 VWA2Q5GFL6 755 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 OR51E1Q8TCB6 317 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SDF2Q99470 211 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 SAGE1Q9NXZ1 904 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 ELLP55199 621 aaPredicted RBP20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 OR8G1Q15617 311 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 GCNT2Q8N0V5 402 aa20.28■□□□□ 0.84
TM9SF3-201ENST00000371142 MYO18AQ92614 2054 aaKnown RBP20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 HOXC11O43248 304 aaPredicted RBP20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 CSF3P09919 207 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 LYSMD2Q8IV50 215 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 SLC43A2Q8N370 569 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 SHARPINQ9H0F6 387 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 DVL1O14640 695 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 S100A11P31949 105 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 DVL1P1P54792 670 aaPredicted RBP20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 TLE1Q04724 770 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 DOK3Q7L591 496 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 ISL2Q96A47 359 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 PARP12Q9H0J9 701 aaKnown RBP20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 POM121BA6NF01 834 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 QDPRP09417 244 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 HMGN3Q15651 99 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 SOHLH1Q5JUK2 328 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 CHST11Q9NPF2 352 aa20.27■□□□□ 0.84
TM9SF3-201ENST00000371142 PRRT4C9JH25 899 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 FAM199XQ6PEV8 388 aaPredicted RBP20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 LGI3Q8N145 548 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 OR51A4Q8NGJ6 313 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 CMTM2Q8TAZ6 248 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 MITD1Q8WV92 249 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 WBP2Q969T9 261 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 C8orf44Q96CB5 159 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 UFSP2Q9NUQ7 469 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 MYH4Q9Y623 1939 aa20.27■□□□□ 0.83
TM9SF3-201ENST00000371142 CHST2Q9Y4C5 530 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 ECI1P42126 302 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 CCR9P51686 369 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 FOXQ1Q9C009 403 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 ACER3Q9NUN7 267 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 MTCH1Q9NZJ7 389 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 FGF17O60258 216 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 HIST1H1CP16403 213 aaKnown RBP20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 GNB1P62873 340 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 OR10R2Q8NGX6 335 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 PLEKHF2Q9H8W4 249 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 DUSP22Q9NRW4 184 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 C19orf53Q9UNZ5 99 aaPredicted RBP20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 OR51B4Q9Y5P0 310 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 A0A1W2PNR3 127 aa20.26■□□□□ 0.83
TM9SF3-201ENST00000371142 A0A1W2PPH5 198 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms