RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 LRIT1Q9P2V4 623 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 MCTS1Q9ULC4 181 aaKnown RBP15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 POU3F2P20265 443 aaPredicted RBP15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 CLEC1AQ8NC01 280 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 ABHD5Q8WTS1 349 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 BTF3L4Q96K17 158 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 TMEM231Q9H6L2 316 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 KIR3DX1Q9H7L2 352 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 RAB9BQ9NP90 201 aa15.69■□□□□ 0.1
PTP4A1-201ENST00000370651 RNF212BA8MTL3 300 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 JTBO76095 146 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 PHLDA2Q53GA4 152 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 OR51A4Q8NGJ6 313 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 C19orf43Q9BQ61 176 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 TGIF2Q9GZN2 237 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 POMT2Q9UKY4 750 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 PTRH2Q9Y3E5 179 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 ALOX5APP20292 161 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 LAP3P28838 519 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 SDHAP31040 664 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 STAC2Q6ZMT1 411 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 ABHD6Q9BV23 337 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 BANF2Q9H503 90 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 PATZ1Q9HBE1 687 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 ACAD8Q9UKU7 415 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 ARGFXA6NJG6 315 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 FOXK1P85037 733 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 IKZF1Q13422 519 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 BAP18Q8IXM2 172 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 SUMF1Q8NBK3 374 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 GCDHQ92947 438 aaPredicted RBP15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 PIGTQ969N2 578 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 SEMA6CQ9H3T2 930 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 CRYBB2P43320 205 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 ZNF133P52736 654 aaPredicted RBP15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 FAM74A1Q5RGS3 127 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 BORCS7Q96B45 105 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 DERL3Q96Q80 235 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 CCNL2Q96S94 520 aaPredicted RBP15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 PLA2G12AQ9BZM1 189 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 NECAP2Q9NVZ3 263 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 KLK11Q9UBX7 282 aa15.68■□□□□ 0.1
PTP4A1-201ENST00000370651 TRAV1-2A0A0B4J238 106 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 ST8SIA3O43173 380 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 FOLR3P41439 243 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 RNLSQ5VYX0 342 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 MARCH3Q86UD3 253 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 OR5L1Q8NGL2 311 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 CDCA3Q99618 268 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SLC35A1P78382 337 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 CATR1Q13166 79 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 BPHLQ86WA6 291 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 OR13C8Q8NGS7 320 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 OR2G3Q8NGZ4 309 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SFT2D1Q8WV19 159 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 ZNF775Q96BV0 537 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 WDR89Q96FK6 387 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 C12orf57Q99622 126 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 DNAJB11Q9UBS4 358 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 MMACHCQ9Y4U1 282 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 HPNP05981 417 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 TMEM88Q6PEY1 159 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 APH1BQ8WW43 257 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SEMA4CQ9C0C4 833 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SPACA1Q9HBV2 294 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 THAP10Q9P2Z0 257 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 EXO1Q9UQ84 846 aaKnown RBP15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SLC2A1P11166 492 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 KITLGP21583 273 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 BCKDHBP21953 392 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 DPTQ07507 201 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 SSX1Q16384 188 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 C2orf76Q3KRA6 126 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 CAMKMTQ7Z624 323 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 OR9K2Q8NGE7 335 aa15.67■□□□□ 0.1
PTP4A1-201ENST00000370651 P2RX1P51575 399 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 SNRPNP63162 240 aaKnown RBP15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 LINC00303Q3SY05 128 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 EMC4Q5J8M3 183 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 PRSS42Q7Z5A4 293 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 NAXDQ8IW45 347 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 ARSGQ96EG1 525 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 NKX3-1Q99801 234 aaPredicted RBP15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 OR14J1Q9UGF5 321 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 PCDHGA5Q9Y5G8 931 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 OR6C76A6NM76 312 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 S100A8P05109 93 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 CD38P28907 300 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 ADIRFQ15847 76 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 BRICD5Q6PL45 260 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 CPEB2Q7Z5Q1 589 aaKnown RBP15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 CLRN3Q8NCR9 226 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 OR1M1Q8NGA1 313 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 OR1J2Q8NGS2 313 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 CPT1CQ8TCG5 803 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 SEH1LQ96EE3 360 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 WWTR1Q9GZV5 400 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 FGF17O60258 216 aa15.66■□□□□ 0.1
PTP4A1-201ENST00000370651 NME2P1O60361 137 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms