RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 PSG4Q00888 419 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 HSF2Q03933 536 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 PLP2Q04941 152 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 KRR1Q13601 381 aaKnown RBP12.44□□□□□ -0.42
SSR4-203ENST00000370086 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
SSR4-203ENST00000370086 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 DPY19L2P2Q6ZN68 376 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 ARHGAP24Q8N264 748 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 NDEL1Q9GZM8 345 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 RAB1BQ9H0U4 201 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 WNT5BQ9H1J7 359 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 CDH20Q9HBT6 801 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 TAS2R1Q9NYW7 299 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 FBXO9Q9UK97 447 aaPredicted RBP12.44□□□□□ -0.42
SSR4-203ENST00000370086 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
SSR4-203ENST00000370086 CSPG4Q6UVK1 2322 aa12.44□□□□□ -0.42
SSR4-203ENST00000370086 ANK3Q12955 4377 aaKnown RBP12.44□□□□□ -0.42
SSR4-203ENST00000370086 TLN2Q9Y4G6 2542 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 LOC100509620A0A075B734 347 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 INAFM1C9JVW0 142 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 AHCYL1O43865 530 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 OR10H3O60404 316 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 CSF3P09919 207 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 SLC25A16P16260 332 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 CTLA4P16410 223 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 STOMP27105 288 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 PCSK6P29122 969 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 APLNRP35414 380 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 PDLIM4P50479 330 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 UCP2P55851 309 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 RPS23P62266 143 aaKnown RBP12.43□□□□□ -0.42
SSR4-203ENST00000370086 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
SSR4-203ENST00000370086 MAD2L1BPQ15013 274 aaPredicted RBP12.43□□□□□ -0.42
SSR4-203ENST00000370086 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 LCN8Q6JVE9 175 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 PTCHD4Q6ZW05 846 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 OR1J2Q8NGS2 313 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 FANK1Q8TC84 345 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 CLPTM1LQ96KA5 538 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 POM121L2Q96KW2 1035 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 ZNF416Q9BWM5 594 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 OR2H1Q9GZK4 316 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 C1orf21Q9H246 121 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 TPK1Q9H3S4 243 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 EMC7Q9NPA0 242 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
SSR4-203ENST00000370086 PRPF19Q9UMS4 504 aaKnown RBP12.43□□□□□ -0.42
SSR4-203ENST00000370086 ABCA1O95477 2261 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 SYNGR3O43761 229 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 PPP1R3DO95685 299 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 TXNDC12O95881 172 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 CLPTM1O96005 669 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 MSR1P21757 451 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 CCNOP22674 350 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 FPR3P25089 353 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 CDKN2AP42771 156 aaKnown RBP12.42□□□□□ -0.42
SSR4-203ENST00000370086 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 MAGEA2P43356 314 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 GSSP48637 474 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 RPS6KA3P51812 740 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 HMGA2P52926 109 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 LOXL1Q08397 574 aaPredicted RBP12.42□□□□□ -0.42
SSR4-203ENST00000370086 RFX4Q33E94 735 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 MTX3Q5HYI7 312 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 OTPQ5XKR4 325 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 RGS7BPQ6MZT1 257 aaPredicted RBP12.42□□□□□ -0.42
SSR4-203ENST00000370086 C1orf94Q6P1W5 598 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 TRPM8Q7Z2W7 1104 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 DHFR2Q86XF0 187 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 BCAS4Q8TDM0 211 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 GNPDA2Q8TDQ7 276 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 NEU4Q8WWR8 484 aaPredicted RBP12.42□□□□□ -0.42
SSR4-203ENST00000370086 SYT4Q9H2B2 425 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 LRMDAQ9H2I8 198 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 OR52D1Q9H346 318 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 MUC13Q9H3R2 512 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 VSX1Q9NZR4 365 aaPredicted RBP12.42□□□□□ -0.42
SSR4-203ENST00000370086 REV1Q9UBZ9 1251 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 LYVE1Q9Y5Y7 322 aa12.42□□□□□ -0.42
SSR4-203ENST00000370086 LOC390937A0A1W2PQ73 354 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 C5orf49A4QMS7 147 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 M0R233 179 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 CD5LO43866 347 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 SLC16A7O60669 478 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 MPZL1O95297 269 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 LCKP06239 509 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 DAOP14920 347 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 ZNF250P15622 560 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 WNT5AP41221 380 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
SSR4-203ENST00000370086 RAD52P43351 418 aa12.41□□□□□ -0.42
SSR4-203ENST00000370086 PPP1R8Q12972 351 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms