RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 UGT2A1Q9Y4X1 527 aa10.87□□□□□ -0.67
TUBE1-202ENST00000368662 MED12LQ86YW9 2145 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
TUBE1-202ENST00000368662 GPANK1O95872 356 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 ADRA2AP08913 450 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 MAP2K4P45985 399 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 WNT4P56705 351 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 ROR2Q01974 943 aaKnown RBP10.86□□□□□ -0.67
TUBE1-202ENST00000368662 NFATC3Q12968 1075 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 FBXW9Q5XUX1 488 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 SLC18B1Q6NT16 456 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 LHFPL3Q86UP9 236 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 CNEP1R1Q8N9A8 125 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 OR52N1Q8NH53 320 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 ASB17Q8WXJ9 295 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 C11orf40Q8WZ69 217 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 TBX5Q99593 518 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 TTYH2Q9BSA4 534 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 SLC7A10Q9NS82 523 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 CLEC2DQ9UHP7 191 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 EPG5Q9HCE0 2579 aa10.86□□□□□ -0.67
TUBE1-202ENST00000368662 CACNA1BQ00975 2339 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF99A8MXY4 864 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 PTHP01270 115 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SPARCP09486 303 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ALOX5APP20292 161 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TTKP33981 857 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 KIR2DL2P43627 348 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SPHARQ15513 63 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 MED22Q15528 200 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 CEACAM16Q2WEN9 425 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SEM1Q6ZVN7 128 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SNX33Q8WV41 574 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 MUL1Q969V5 352 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 FOXB1Q99853 325 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF649Q9BS31 505 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TAS2R16Q9NYV7 291 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 POLR1DQ9Y2S0 133 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZGRF1Q86YA3 2104 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 DOCK7Q96N67 2140 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ATXN7O15265 892 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 MPZL1O95297 269 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 CEACAM8P31997 349 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 CDAP32320 146 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ALDH3B2P48448 385 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SH3BGRP55822 239 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SIRPAP78324 504 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF85Q03923 595 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 EGR3Q06889 387 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 MEP1BQ16820 701 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SYT6Q5T7P8 510 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 KCTD18Q6PI47 426 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 KCTD20Q7Z5Y7 419 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 WACQ9BTA9 647 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TMEM38BQ9NVV0 291 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 CYB5R1Q9UHQ9 305 aa10.85□□□□□ -0.67
TUBE1-202ENST00000368662 LSM2Q9Y333 95 aaKnown RBP10.85□□□□□ -0.67
TUBE1-202ENST00000368662 TNFSF13O75888 250 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 TOXO94900 526 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 FARS2O95363 451 aaKnown RBP10.84□□□□□ -0.67
TUBE1-202ENST00000368662 MT-ND5P03915 603 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 TACSTD2P09758 323 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 HCCSP53701 268 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 FAPQ12884 760 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 SGCAQ16586 387 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 FAM27BQ5VT28 67 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF322Q6U7Q0 402 aaPredicted RBP10.84□□□□□ -0.67
TUBE1-202ENST00000368662 PLEKHG7Q6ZR37 379 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 ZNF627Q7L945 461 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 LINGO2Q7L985 606 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 OR2AJ1Q8NGZ0 328 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 SMAP2Q8WU79 429 aaPredicted RBP10.84□□□□□ -0.67
TUBE1-202ENST00000368662 THEM6Q8WUY1 208 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 NABP1Q96AH0 204 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 PLSCR4Q9NRQ2 329 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 TINAGQ9UJW2 476 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 PROCRQ9UNN8 238 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 HSPB2A8KAH6 182 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 E9PLN8 166 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 SULT1C4O75897 302 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 LCKP06239 509 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 GLI4P10075 376 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 CD8BP10966 210 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 EDNRAP25101 427 aa10.84□□□□□ -0.67
TUBE1-202ENST00000368662 CTSSP25774 331 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms