RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 FAM122BQ7Z309 247 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF101Q8IZC7 436 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR13C2Q8NGS9 318 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SYNPRQ8TBG9 265 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 C11orf40Q8WZ69 217 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NSMAFQ92636 917 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 C7orf34Q96L11 122 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RBP7Q96R05 134 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SNX18Q96RF0 628 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 WNT5BQ9H1J7 359 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NMNAT1Q9HAN9 279 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NKIRAS2Q9NYR9 191 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TAAR3PQ9P1P4 343 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ENPP4Q9Y6X5 453 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GSTA4O15217 222 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NCK1P16333 377 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LAP3P28838 519 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PRDX6P30041 224 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 APLNRP35414 380 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MAGEB1P43366 347 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LIMS1P48059 325 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TMEM33P57088 247 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 KLF3P57682 345 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PSME3P61289 254 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ERVK-25P63136 954 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TOP3AQ13472 1001 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 DGCR6Q14129 220 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ENDOGQ14249 297 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SGCAQ16586 387 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZBED5Q49AG3 693 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF730Q6ZMV8 503 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FKBP9P1Q75LS8 142 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SYT9Q86SS6 491 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PHC2Q8IXK0 858 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LINC01356Q8N9X3 169 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CMTM5Q96DZ9 223 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MARS2Q96GW9 593 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 DHRS1Q96LJ7 313 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 KCTD14Q9BQ13 255 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FUZQ9BT04 418 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF416Q9BWM5 594 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR2H1Q9GZK4 316 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LRMDAQ9H2I8 198 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 KCNN2Q9H2S1 579 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 HINT3Q9NQE9 182 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF275Q9NSD4 429 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 DCAF13Q9NV06 445 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SLCO1C1Q9NYB5 712 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
TNFRSF1A-202ENST00000366159 A0A1W2PPW3 197 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 A6NIZ1 184 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 WNT9BO14905 357 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PHF1O43189 567 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 AHCYL1O43865 530 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SNX3O60493 162 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LCKP06239 509 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CD14P08571 375 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 DRD4P21917 467 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OMPP47874 163 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MMP15P51511 669 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FXYD6P3P58550 94 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RAP1BP61224 184 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RAP1AP62834 184 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 HSF2Q03933 536 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CR1LQ2VPA4 569 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MESTQ5EB52 335 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GLYATQ6IB77 296 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 UGT2A3Q6UWM9 527 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR1J1Q8NGS3 322 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 AKR7LQ8NHP1 331 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CLDND2Q8NHS1 167 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GPX7Q96SL4 187 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 WACQ9BTA9 647 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR51B6Q9H340 312 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CCNB1IP1Q9NPC3 277 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NRIP3Q9NQ35 241 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 POLE4Q9NR33 117 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GPR160Q9UJ42 338 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 KLHL21Q9UJP4 597 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RPS6KA6Q9UK32 745 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SIGLEC7Q9Y286 467 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ADAM18Q9Y3Q7 739 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SEMG1P04279 462 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SRD5A1P18405 259 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RHCEP18577 417 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CRYBB2P43320 205 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GPR4P46093 362 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SELENOVP59797 346 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LMO4P61968 165 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NKPD1Q17RQ9 610 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PCGF3Q3KNV8 242 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MBNL2Q5VZF2 373 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms