RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GPR148Q8TDV2 347 aa17.23■□□□□ 0.35
CMTM3-201ENST00000361909 GRHL3Q8TE85 626 aa17.23■□□□□ 0.35
CMTM3-201ENST00000361909 SLC22A18Q96BI1 424 aa17.23■□□□□ 0.35
CMTM3-201ENST00000361909 TRAV18A0A075B6X5 111 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 LOC100289279A0A1B0GTE1 492 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 UPK3AO75631 287 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 CTSEP14091 401 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 MAP3K8P41279 467 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 KCNJ3P48549 501 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 PRKXP51817 358 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 OR6K6Q8NGW6 343 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 PPP1R1CQ8WVI7 109 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 MKKSQ9NPJ1 570 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 ZNF230Q9UIE0 474 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 KCNE5Q9UJ90 142 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 NOP16Q9Y3C1 178 aaKnown RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 OR10H1Q9Y4A9 318 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 A0A0A6YYH2 397 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 MEX3AA1L020 520 aaKnown RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 A6NJ64 397 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 UBE2CO00762 179 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 ACTL6AO96019 429 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 DCNP07585 359 aaKnown RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 GUSBP08236 651 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 HOXA6P31267 233 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 SLC25A1P53007 311 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 PEA15Q15121 130 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 TAF13Q15543 124 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 ATPAF1Q5TC12 328 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 LINC00114Q6XXX2 140 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 USP53Q70EK8 1073 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 OR2L3Q8NG85 312 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 CDC6Q99741 560 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 TCEAL2Q9H3H9 227 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 APOBEC3BQ9UH17 382 aaKnown RBP17.22■□□□□ 0.35
CMTM3-201ENST00000361909 SLCO1B1Q9Y6L6 691 aa17.22■□□□□ 0.35
CMTM3-201ENST00000361909 PEX12O00623 359 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 EIF1AYO14602 144 aaKnown RBP17.21■□□□□ 0.35
CMTM3-201ENST00000361909 BRINP1O60477 761 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 S100PP25815 95 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 CMPK1P30085 196 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 EIF1AXP47813 144 aaKnown RBP17.21■□□□□ 0.35
CMTM3-201ENST00000361909 GUCA2AQ02747 115 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 RASGEF1BQ0VAM2 473 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 ALG10BQ5I7T1 473 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 FHL5Q5TD97 284 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 TMEM71Q6P5X7 295 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 ZNF704Q6ZNC4 412 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-201ENST00000361909 C15orf54Q8N8G6 183 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 OR4E2Q8NGC2 313 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 OR5AP2Q8NGF4 316 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 OR1J2Q8NGS2 313 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 PIK3IP1Q96FE7 263 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 GPX7Q96SL4 187 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-201ENST00000361909 EGLN1Q9GZT9 426 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 TLNRD1Q9H1K6 362 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 SRMSQ9H3Y6 488 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 GSN-AS1Q9NRJ2 163 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 UQCC1Q9NVA1 299 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 SLC2A8Q9NY64 477 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 FLRT3Q9NZU0 649 aa17.21■□□□□ 0.35
CMTM3-201ENST00000361909 CCDC163A0A0D9SF12 145 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 FAM221BA6H8Z2 402 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 FADS1O60427 444 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 CD74P04233 296 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 S100A6P06703 90 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 POU3F4P49335 361 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 PNLIPRP2P54317 469 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 PJVKQ0ZLH3 352 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 MEF2DQ14814 521 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 KIR2DS3Q14952 304 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 RAB11BQ15907 218 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 LINC01590Q5TEZ4 76 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 PRAMEF17Q5VTA0 474 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 FAHD2BQ6P2I3 314 aaPredicted RBP17.21■□□□□ 0.34
CMTM3-201ENST00000361909 TAF8Q7Z7C8 310 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 TMED4Q7Z7H5 227 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 NANPQ8TBE9 248 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 COL26A1Q96A83 441 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 ZBTB8AQ96BR9 441 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 FAHD2AQ96GK7 314 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 OR51M1Q9H341 326 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 SEMA6CQ9H3T2 930 aa17.21■□□□□ 0.34
CMTM3-201ENST00000361909 ARHGEF17Q96PE2 2063 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 TEX13DA0A0J9YY54 714 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 IDSB3KWA1 339 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 SLC17A2O00624 439 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 EIF1BO60739 113 aaKnown RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 LDB3O75112 727 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 ABHD16AO95870 558 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 STATHP02808 62 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 MPZP25189 248 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 PEBP1P30086 187 aaKnown RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 RPL4P36578 427 aaKnown RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 EIF1P41567 113 aaKnown RBP17.2■□□□□ 0.34
CMTM3-201ENST00000361909 PTGFRP43088 359 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 SOX2P48431 317 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 BTN3A2P78410 334 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 ZXDAP98168 799 aa17.2■□□□□ 0.34
CMTM3-201ENST00000361909 TCEA2Q15560 299 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms