RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 OR52W1Q6IF63 320 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 STEAP1BQ6NZ63 245 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 ANKRD16Q6P6B7 361 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 CORO6Q6QEF8 472 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 SHISA6Q6ZSJ9 500 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 OR1J4Q8NGS1 313 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 GPR148Q8TDV2 347 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 HOXB13Q92826 284 aaPredicted RBP9.54□□□□□ -0.88
SMC3-201ENST00000361804 INTS14Q96SY0 518 aa9.54□□□□□ -0.88
SMC3-201ENST00000361804 CDC40O60508 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC3-201ENST00000361804 TSPAN9O75954 239 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 UTS2O95399 124 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 AMY2AP04746 511 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 CTLA4P16410 223 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 CTHP32929 405 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 DEFA5Q01523 94 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 FMODQ06828 376 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 RHOUQ7L0Q8 258 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 C19orf47Q8N9M1 422 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 MRPL38Q96DV4 380 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 MFRPQ9BY79 579 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 COMMD4Q9H0A8 199 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 APMAPQ9HDC9 416 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 MRPL22Q9NWU5 206 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 TRBV5-7A0A0A0MS05 114 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 ZNF254O75437 659 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 PRSS3P35030 304 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 ZNF117Q03924 483 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 EIF2B5Q13144 721 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 GABRG1Q8N1C3 465 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 BVESQ8NE79 360 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 SCARB1Q8WTV0 552 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 MRPS24Q96EL2 167 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 TMEM185BQ9H7F4 350 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 EVA1AQ9H8M9 152 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 POLE3Q9NRF9 147 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 NAGAP17050 411 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 EIF1AXP47813 144 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 LUMP51884 338 aaPredicted RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 ZP2Q05996 745 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 ZNF595Q8IYB9 648 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 JAGN1Q8N5M9 183 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 CLEC1AQ8NC01 280 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 SPACA5Q96QH8 159 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 ARPC5LQ9BPX5 153 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 G6PC3Q9BUM1 346 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 SEMA6CQ9H3T2 930 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 DHCR7Q9UBM7 475 aaKnown RBP9.53□□□□□ -0.88
SMC3-201ENST00000361804 PFDN2Q9UHV9 154 aa9.53□□□□□ -0.88
SMC3-201ENST00000361804 SNRPGP15A8MWD9 76 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 A8MXK9 166 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 SULT1B1O43704 296 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 IL5P05113 134 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 OR4E1P0C645 316 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 ZNF273Q14593 569 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 LHFPL5Q8TAF8 219 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 MCHR2Q969V1 340 aa9.52□□□□□ -0.88
SMC3-201ENST00000361804 OPN1LWP04000 364 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 AKAIN1P0CW23 69 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 TNFRSF4P43489 277 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 INSM1Q01101 510 aaPredicted RBP9.52□□□□□ -0.89
SMC3-201ENST00000361804 TAF13Q15543 124 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 RAB11BQ15907 218 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ACKR1Q16570 336 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ARMC6Q6NXE6 501 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 STEAP2Q8NFT2 490 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SEH1LQ96EE3 360 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ZC3H10Q96K80 434 aaKnown RBP9.52□□□□□ -0.89
SMC3-201ENST00000361804 C12orf10Q9HB07 376 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 PLEKHA6Q9Y2H5 1048 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SPAG17Q6Q759 2223 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 WIPF3A6NGB9 483 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 H3BMH7 237 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SCDO00767 359 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ZNF264O43296 627 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SDC3O75056 442 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 RAB3DO95716 219 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 CTSEP14091 401 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 AVPR2P30518 371 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ADAM8P78325 824 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ZNF546Q86UE3 836 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 OR6N1Q8NGY5 312 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 TGM7Q96PF1 710 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SLC6A7Q99884 636 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 DUSP15Q9H1R2 295 aaPredicted RBP9.52□□□□□ -0.89
SMC3-201ENST00000361804 CHRDQ9H2X0 955 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 ZC4H2Q9NQZ6 224 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 SOHLH2Q9NX45 425 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 CYP8B1Q9UNU6 501 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 EMC9Q9Y3B6 208 aa9.52□□□□□ -0.89
SMC3-201ENST00000361804 B3GALNT1O75752 331 aa9.51□□□□□ -0.89
SMC3-201ENST00000361804 ANOS1P23352 680 aa9.51□□□□□ -0.89
SMC3-201ENST00000361804 MPGP29372 298 aa9.51□□□□□ -0.89
SMC3-201ENST00000361804 CAPZA2P47755 286 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms