RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SLC5A12Q1EHB4 618 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SFXN4Q6P4A7 337 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 FAM111BQ6SJ93 734 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 EGFL6Q8IUX8 553 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 HPSE2Q8WWQ2 592 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 MKRN2Q9H000 416 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 C12orf49Q9H741 205 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 RPH3ALQ9UNE2 315 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 MAKP20794 623 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ABCD3P28288 659 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 C21orf33P30042 268 aaPredicted RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 PPP1CAP62136 330 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SNRPD2P62316 118 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 SMIM21Q3B7S5 101 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TMEM64Q6YI46 380 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 MED13Q9UHV7 2174 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CRYABP02511 175 aaKnown RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 SLC48A1Q6P1K1 146 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ZFP90Q8TF47 636 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TMEM174Q8WUU8 243 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 BARX1Q9HBU1 254 aaPredicted RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 ACACBO00763 2458 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 GM2AP17900 193 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ZNF718Q3SXZ3 478 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 MED25Q71SY5 747 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 SLC51BQ86UW2 128 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CHRDL1Q9BU40 450 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 POFUT1Q9H488 388 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TNFRSF10CO14798 259 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 PXDC1Q5TGL8 231 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 INSM2Q96T92 566 aaPredicted RBP8.91□□□□□ -0.98
CUX1-203ENST00000360264 NMES1Q9C002 83 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 LTC4SQ16873 150 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 TMEM52BQ4KMG9 183 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CDH26Q8IXH8 852 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CMTM3Q96MX0 182 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 CHST11Q9NPF2 352 aa8.91□□□□□ -0.98
CUX1-203ENST00000360264 ATP1B1P05026 303 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 CTRB1P17538 263 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 TNFRSF1BP20333 461 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SIX1Q15475 284 aaPredicted RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 THEM4Q5T1C6 240 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SYT6Q5T7P8 510 aaPredicted RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 CTRB2Q6GPI1 263 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 VRK2Q86Y07 508 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 BPIFCQ8NFQ6 507 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 FAM213BQ8TBF2 198 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 ZNF251Q9BRH9 671 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 NOTCH2Q04721 2471 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 DNAJC25-GNG10A0A024R161 153 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SMLR1H3BR10 107 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 KIR2DS2P43631 304 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 FAM96BQ9Y3D0 163 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 KDM3BQ7LBC6 1761 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OR51F2Q8NH61 342 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 GIMAP1Q8WWP7 306 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 KRBA1A5PL33 1030 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 MYADML2A6NDP7 307 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SMAD6O43541 496 aaKnown RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 SRP9P49458 86 aaKnown RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 HOXC5Q00444 222 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 AVPI1Q5T686 147 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 ZC3HAV1LQ96H79 300 aaKnown RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 UBE2ZQ9H832 354 aaPredicted RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 HEYLQ9NQ87 328 aaPredicted RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 GAR1Q9NY12 217 aaKnown RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 USP22Q9UPT9 525 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 TTC28Q96AY4 2481 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 JTBO76095 146 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OR2F2O95006 317 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 PVRP15151 417 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 MTNR1BP49286 362 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OR2F1Q13607 317 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 PLK3Q9H4B4 646 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 GPR55Q9Y2T6 319 aaPredicted RBP8.9□□□□□ -0.98
CUX1-203ENST00000360264 PUS1Q9Y606 427 aaKnown RBP eCLIP8.9□□□□□ -0.98
CUX1-203ENST00000360264 FAM183AA6NL82 134 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 E5RGE8 158 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 CYTIPO60759 359 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SMIM17P0DL12 118 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 CALCBP10092 127 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 IER5LQ5T953 404 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 FCRL6Q6DN72 434 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 TANGO2Q6ICL3 276 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OR2A2Q6IF42 318 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 SLC35D2Q76EJ3 337 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 PARP16Q8N5Y8 322 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 MS4A8Q9BY19 250 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 FAM234AQ9H0X4 552 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 GAREM1Q9H706 876 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 MAST2Q6P0Q8 1798 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 OPRL1P41146 370 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 L3MBTL4Q8NA19 623 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 CSF3RQ99062 836 aa8.9□□□□□ -0.98
CUX1-203ENST00000360264 THAP10Q9P2Z0 257 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms