RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DNAJC27Q9NZQ0 273 aa10.88□□□□□ -0.67
NIF3L1-201ENST00000359683 NBPF19A0A087WUL8 3843 aa10.88□□□□□ -0.67
NIF3L1-201ENST00000359683 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC22A31A6NKX4 558 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 LYZL6O75951 148 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 MPZL1O95297 269 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 CLDN14O95500 239 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 GPANK1O95872 356 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 TFP02787 698 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 HRGP04196 525 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 HTR1FP30939 366 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 FMO3P31513 532 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 CDH11P55287 796 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 TFF3Q07654 80 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 FAM27BQ5VT28 67 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 OR7E24Q6IFN5 339 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 LAIR2Q6ISS4 152 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF813Q6ZN06 617 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 CNIH3Q8TBE1 160 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 C11orf40Q8WZ69 217 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 RNASE6Q93091 150 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 KISS1RQ969F8 398 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 RFKQ969G6 155 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 FOXN4Q96NZ1 517 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 NELFAQ9H3P2 528 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 MARCH7Q9H992 704 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 GALNT8Q9NY28 637 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 WARS2Q9UGM6 360 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 A0A1W2PPL8 197 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 CIB4A0PJX0 185 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SH3D21A4FU49 640 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SNTNA6NMZ2 147 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 OR8G3PP0DMU2 310 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 B4GALT1P15291 398 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 MSR1P21757 451 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 GSTT1P30711 240 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 TSC22D1Q15714 1073 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SGCAQ16586 387 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 BHLHA15Q7RTS1 189 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SKA3Q8IX90 412 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 SLC22A24Q8N4F4 322 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 OR6K6Q8NGW6 343 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 ZMYND19Q96E35 227 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 USB1Q9BQ65 265 aaKnown RBP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 OR10A4Q9H209 315 aa10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.87□□□□□ -0.67
NIF3L1-201ENST00000359683 CACNA1DQ01668 2161 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 A0A096LPE4 126 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 A0A1W2PPZ6 126 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 TVP23AA6NH52 213 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 C16orf97H3BN30 126 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 RAD51DO75771 328 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 SEC14L2O76054 403 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 UGT2B10P36537 528 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 RPS7P62081 194 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 GGTLC2Q14390 218 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 PCK2Q16822 640 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 TBRG1Q3YBR2 411 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 TEX30Q5JUR7 227 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 LCN1P1Q5VSP4 162 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 KLHL24Q6TFL4 600 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 UGT2A3Q6UWM9 527 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 TIGD4Q8IY51 512 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 CCDC36Q8IYA8 594 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 C17orf78Q8N4C9 275 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 WDR31Q8NA23 367 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 STEAP2Q8NFT2 490 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 HTRA1Q92743 480 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 LRRC46Q96FV0 321 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 CNBD2Q96M20 576 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 PLCXD1Q9NUJ7 323 aa10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 MRPS18AQ9NVS2 196 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 UTP20O75691 2785 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-201ENST00000359683 FARS2O95363 451 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 HLA-DQA2P01906 255 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 CST2P09228 141 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 IL32P24001 234 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 CCKARP32238 428 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 MTNR1AP48039 350 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 CXCR4P61073 352 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 ENDOGQ14249 297 aaKnown RBP10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 MEP1BQ16820 701 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 HIKESHIQ53FT3 197 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 C1QTNF12Q5T7M4 302 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 P2RY8Q86VZ1 359 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 SH3GL3Q99963 347 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 WACQ9BTA9 647 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 ZNF416Q9BWM5 594 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 WDR76Q9H967 626 aa10.85□□□□□ -0.67
NIF3L1-201ENST00000359683 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms