RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 DUSP15Q9H1R2 295 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 METTL7AQ9H8H3 244 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 TRBV5-7A0A0A0MS05 114 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 TRBV11-1A0A0K0K1C0 115 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 LOC100289279A0A1B0GTE1 492 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ARPC1BO15143 372 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 SCRG1O75711 98 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ZFAND5O76080 213 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ALX3O95076 343 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 PRSS3P35030 304 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 OLFML2AQ68BL7 652 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 PAPD4Q6PIY7 484 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 NDUFAF7Q7L592 441 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ZNF519Q8TB69 540 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 HLA-CQ95604 372 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 NUDT22Q9BRQ3 303 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ZNF69Q9UC07 566 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ANKRD20A5PA0PJZ0 165 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 H3BMH7 237 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 GLSO94925 669 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 IFNA7P01567 189 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 H2BFMP0C1H6 154 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 PNLIPP16233 465 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 RPS27P42677 84 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ROM1Q03395 351 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 SSBP1Q04837 148 aaKnown RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 MELKQ14680 651 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 PCGF3Q3KNV8 242 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 C1QL3Q5VWW1 255 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 LYSMD4Q5XG99 296 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 LRRC69Q6ZNQ3 347 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 SLC38A6Q8IZM9 456 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 ZNF441Q8N8Z8 693 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 OR13C3Q8NGS6 347 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 THAP3Q8WTV1 239 aaPredicted RBP8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 OR11A1Q9GZK7 315 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 BEX1Q9HBH7 125 aa8.39□□□□□ -1.07
GTF3C2-202ENST00000359541 TRANK1O15050 2925 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 MEIKINA0A087WXM9 373 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ANKRD34BA5PLL1 514 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 C4orf47A7E2U8 309 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 SLC17A2O00624 439 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 NR2C1P13056 603 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 RBMS2Q15434 407 aaKnown RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 LRRTM1Q86UE6 522 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 DNAAF1Q8NEP3 725 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 NAT6Q93015 286 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 FAM3DQ96BQ1 224 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 FOXRED1Q96CU9 486 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 OR6C1Q96RD1 312 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 PTDSS2Q9BVG9 487 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ATG5Q9H1Y0 275 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 CHST11Q9NPF2 352 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 GPN3Q9UHW5 284 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 H3BSH0 61 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ZNF208O43345 1280 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 RLN1P04808 185 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 BCKDHBP21953 392 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ACHEP22303 614 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 MAGEB1P43366 347 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 POU3F4P49335 361 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 VEGFCP49767 419 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 POU3F1Q03052 451 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 DEGS2Q6QHC5 323 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ANKRD37Q7Z713 158 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 BEST4Q8NFU0 473 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 OR6M1Q8NGM8 313 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 OR2T35Q8NGX2 323 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 CCDC107Q8WV48 283 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 MED30Q96HR3 178 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 CRB3Q9BUF7 120 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 POTEKPQ9BYX7 375 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ULBP3Q9BZM4 244 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 PTGES2Q9H7Z7 377 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 COA3Q9Y2R0 106 aaPredicted RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 R4GMQ9 66 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 TRAV18A0A075B6X5 111 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 IGHV3-20A0A0C4DH32 117 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 GGT3PA6NGU5 568 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 PRR32B1ATL7 298 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 TSPAN4O14817 238 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 NPIPB7O75200 414 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 UBCP0CG48 685 aaKnown RBP8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 AKAIN1P0CW23 69 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 GIMD1P0DJR0 217 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 SULT1A3P0DMM9 295 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 SULT1A4P0DMN0 295 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 GTF2F2P13984 249 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 PTH2RP49190 550 aa8.38□□□□□ -1.07
GTF3C2-202ENST00000359541 ZP4Q12836 540 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms