RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ADAM8P78325 824 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 TPBGQ13641 420 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ETFDHQ16134 617 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 HIST3H3Q16695 136 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 PLEKHG7Q6ZR37 379 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SSX6Q7RTT6 188 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 EGFL6Q8IUX8 553 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 GLB1L2Q8IW92 636 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 RFLNBQ8N5W9 214 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 SLC26A10Q8NG04 563 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 OTOSQ8NHW6 89 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 RNF128Q8TEB7 428 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 WDYHV1Q96HA8 205 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 TIMP4Q99727 224 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 TTTY10Q9BZA0 68 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 PRRG4Q9BZD6 226 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 ISG20L2Q9H9L3 353 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 BABAM2Q9NXR7 383 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 GLTPQ9NZD2 209 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 LRBAP50851 2863 aa12.28□□□□□ -0.44
PDLIM5-203ENST00000359265 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 AQP7O14520 342 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 GPANK1O95872 356 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 QDPRP09417 244 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 NR4A1P22736 598 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 PSMA1P25786 263 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 LAP3P28838 519 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 GBX2P52951 348 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 OR12D2P58182 307 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 EGR3Q06889 387 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 C3AR1Q16581 482 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 CTF1Q16619 201 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 TP53I3Q53FA7 332 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 AAED1Q7RTV5 226 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 DPY19L4Q7Z388 723 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ATCAYQ86WG3 371 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 MCEMP1Q8IX19 187 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 HAVCR2Q8TDQ0 301 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ASB17Q8WXJ9 295 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 NSMAFQ92636 917 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 MCHR2Q969V1 340 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 TMEM45BQ96B21 275 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 SARAFQ96BY9 339 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 TTYH2Q9BSA4 534 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 B3GAT2Q9NPZ5 323 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 GNG8Q9UK08 70 aa12.27□□□□□ -0.45
PDLIM5-203ENST00000359265 PNMA8CA0A1B0GUJ8 204 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 HSPB2A8KAH6 182 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF593O00488 134 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF432O94892 652 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ATE1O95260 518 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 LALBAP00709 142 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 KRT8P05787 483 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 FCGR2AP12318 317 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ALOX5APP20292 161 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 SELENOPP49908 381 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ZNF133P52736 654 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 SH3BGRP55822 239 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 GPR50Q13585 617 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 RNPS1Q15287 305 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 HSPB2Q16082 182 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 PLEKHN1Q494U1 663 aaPredicted RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 TEX30Q5JUR7 227 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 C10orf128Q5T292 105 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 GDPGP1Q6ZNW5 385 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 C20orf196Q8IYI0 205 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ZFP41Q8N8Y5 198 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 THEM6Q8WUY1 208 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 RPL3LQ92901 407 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 ULBP2Q9BZM5 246 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 PRDM14Q9GZV8 571 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 OR51E2Q9H255 320 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 KCNG2Q9UJ96 466 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 IKZF2Q9UKS7 526 aa12.26□□□□□ -0.45
PDLIM5-203ENST00000359265 STUB1Q9UNE7 303 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms