RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RBM45Q8IUH3 476 aaKnown RBP16.86■□□□□ 0.29
SHANK1-202ENST00000359082 LILRA2Q8N149 483 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 SLC22A12Q96S37 553 aa16.86■□□□□ 0.29
SHANK1-202ENST00000359082 LRP5LA4QPB2 252 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 RAB13P51153 203 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 RPL27P61353 136 aaKnown RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 LGI3Q8N145 548 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 NECAP1Q8NC96 275 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 RBPMSQ93062 196 aaKnown RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 TGIF2Q9GZN2 237 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 HRH3Q9Y5N1 445 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 LGI1O95970 557 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 TMEM52BQ4KMG9 183 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 OR8U1Q8NH10 309 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 NTN4Q9HB63 628 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 MBNL1Q9NR56 388 aaKnown RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 UFSP2Q9NUQ7 469 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 KLK4Q9Y5K2 254 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 MYH7BA7E2Y1 1941 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 TRABD2BA6NFA1 517 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 NME2P1O60361 137 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 CD14P08571 375 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 PIGAP37287 484 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 OR6M1Q8NGM8 313 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 KIR3DX1Q9H7L2 352 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 KCNIP2Q9NS61 270 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 KCND3Q9UK17 655 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 A0A1B0GTW7 788 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 MRPL19P49406 292 aaKnown RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 UBE2IP63279 158 aaKnown RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 YOD1Q5VVQ6 348 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-202ENST00000359082 ABHD17CQ6PCB6 329 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 THNSL2Q86YJ6 484 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 IFI44Q8TCB0 444 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 C4orf47A7E2U8 309 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 SIRPB1O00241 398 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 PDZD11Q5EBL8 140 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 Q6ZSR9 355 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 FAM185AQ8N0U4 392 aa16.85■□□□□ 0.29
SHANK1-202ENST00000359082 GUSBP08236 651 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 ACKR3P25106 362 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 RAD52P43351 418 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 C6orf15Q6UXA7 325 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-202ENST00000359082 ZCCHC4Q9H5U6 513 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 CORINQ9Y5Q5 1042 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 ATP23Q9Y6H3 246 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 K7ESM1 405 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 ATP1B1P05026 303 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 Q6ZRG5 221 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 SLC16A11Q8NCK7 471 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 VN1R2Q8NFZ6 395 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 OR10X1Q8NGY0 326 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 TRIB1Q96RU8 372 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 RIMS4Q9H426 269 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-202ENST00000359082 MED9Q9NWA0 146 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 PADI1Q9ULC6 663 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 F11P03951 625 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 SELEP16581 610 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 PRAMEF5Q5TYX0 476 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 PRAMEF6Q5VXH4 476 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 OR2L13Q8N349 312 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 NMES1Q9C002 83 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 CD1CP29017 333 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 OR51E1Q8TCB6 317 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 CCDC74AQ96AQ1 378 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-202ENST00000359082 Q96M85 177 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 THAP10Q9P2Z0 257 aaPredicted RBP16.84■□□□□ 0.29
SHANK1-202ENST00000359082 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 M0R1B8 84 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 GNB2P62879 340 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 FAM71E1Q6IPT2 247 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 KCNRGQ8N5I3 272 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 OR13F1Q8NGS4 319 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 MARC2Q969Z3 335 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 FAM122AQ96E09 287 aa16.84■□□□□ 0.29
SHANK1-202ENST00000359082 TRDV1A0A1B0GX56 115 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 ABCD4O14678 606 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 TFAP2AP05549 437 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 MMP11P24347 488 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 SUB1P53999 127 aaKnown RBP eCLIP16.83■□□□□ 0.29
SHANK1-202ENST00000359082 DOK3Q7L591 496 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 MAML2Q8IZL2 1156 aaPredicted RBP16.83■□□□□ 0.29
SHANK1-202ENST00000359082 TVP23CQ96ET8 276 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 FAM173AQ9BQD7 235 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 MARCH5Q9NX47 278 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 BOLA1Q9Y3E2 137 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 FITM1A5D6W6 292 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 TMEM202A6NGA9 273 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 ZBTB42B2RXF5 422 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 TEAD1P28347 426 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 NOVP48745 357 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 ETV1P50549 477 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 SNTB1Q13884 538 aaKnown RBP16.83■□□□□ 0.29
SHANK1-202ENST00000359082 SLC51BQ86UW2 128 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 NKAIN4Q8IVV8 208 aa16.83■□□□□ 0.29
SHANK1-202ENST00000359082 KDF1Q8NAX2 398 aaPredicted RBP16.83■□□□□ 0.29
SHANK1-202ENST00000359082 SLC35E1Q96K37 410 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms