RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 KLBQ86Z14 1044 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 GLB1L2Q8IW92 636 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 C4orf36Q96KX1 117 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 CALHM2Q9HA72 323 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 EMC3Q9P0I2 261 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 NOSIPQ9Y314 301 aaKnown RBP16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 TMEM14AQ9Y6G1 99 aa16.05■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF593O00488 134 aaPredicted RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 MAGEB4O15481 346 aaPredicted RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 SLC43A1O75387 559 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 LAP3P28838 519 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 GABRA5P31644 462 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 CDAP32320 146 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 TDGF1P3P51864 188 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 OR12D2P58182 307 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 NCS1P62166 190 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 LSM3P62310 102 aaKnown RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 KRTCAP3Q53RY4 240 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF684Q5T5D7 378 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 SNX33Q8WV41 574 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 INTS12Q96CB8 462 aaKnown RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF837Q96EG3 531 aaPredicted RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 STUB1Q9UNE7 303 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 SF3B6Q9Y3B4 125 aaKnown RBP16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 ITPR1Q14643 2758 aa16.04■□□□□ 0.16
SMARCD3-202ENST00000356800 CACNA1CQ13936 2221 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 MAP1BP46821 2468 aaKnown RBP16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 A0A1W2PPL8 197 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 J3QLW9 94 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 PHYHO14832 338 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 YES1P07947 543 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 NR2C1P13056 603 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF19P17023 458 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 ALOX5APP20292 161 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 CRYBB2P43320 205 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 ENTPD1P49961 510 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 ADAM8P78325 824 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 PRR30Q53SZ7 412 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 KCTD20Q7Z5Y7 419 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 OTOSQ8NHW6 89 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 C11orf40Q8WZ69 217 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 HTRA1Q92743 480 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 TRIB1Q96RU8 372 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 CHCHD6Q9BRQ6 235 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 DCUN1D5Q9BTE7 237 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 KCNG2Q9UJ96 466 aa16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 NCOA6Q14686 2063 aaPredicted RBP16.03■□□□□ 0.16
SMARCD3-202ENST00000356800 GPX5O75715 221 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 HRGP04196 525 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 FCGR2AP12318 317 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 ZNF182P17025 639 aaPredicted RBP16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 CD53P19397 219 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 UGT2B10P36537 528 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 LSAMPQ13449 338 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 PCK2Q16822 640 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 ACSF3Q4G176 576 aaPredicted RBP16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 CD200R1LQ6Q8B3 271 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 NUFIP2Q7Z417 695 aaKnown RBP16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 MCEMP1Q8IX19 187 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 TEX19Q8NA77 164 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 SNRNP40Q96DI7 357 aaKnown RBP16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 AMELYQ99218 206 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 ULBP2Q9BZM5 246 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 LAMP5Q9UJQ1 280 aa16.02■□□□□ 0.16
SMARCD3-202ENST00000356800 LOC100506127A0A0U1RQW1 187 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 AHRRA9YTQ3 701 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 DHHO43323 396 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 MRPL33O75394 65 aaKnown RBP16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 SPARCP09486 303 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 CELP19835 753 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 AGTR1P30556 359 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 EGR3Q06889 387 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 TP53I3Q53FA7 332 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 TEX30Q5JUR7 227 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 FOXL2NBQ6ZUU3 175 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 NDNFQ8TB73 568 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 PELI1Q96FA3 418 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 CENPOQ9BU64 300 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 CXorf56Q9H5V9 222 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 SEC61A2Q9H9S3 476 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 EMC7Q9NPA0 242 aa16.02■□□□□ 0.15
SMARCD3-202ENST00000356800 E9PI62 339 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 PLPP2O43688 288 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 SULT1C4O75897 302 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 TUBA1BP68363 451 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 KCNMB1Q16558 191 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 CCDC58Q4VC31 144 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 TSPO2Q5TGU0 170 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF585AQ6P3V2 769 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 PLEKHG7Q6ZR37 379 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 USP43Q70EL4 1123 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 TUBA1AQ71U36 451 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 P4HA3Q7Z4N8 544 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 ZFP41Q8N8Y5 198 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 ZNF454Q8N9F8 522 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 HAVCR2Q8TDQ0 301 aa16.01■□□□□ 0.15
SMARCD3-202ENST00000356800 ASB17Q8WXJ9 295 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms