RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SSX1Q16384 188 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 LIPKQ5VXJ0 399 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 SLC18B1Q6NT16 456 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 SLC16A12Q6ZSM3 486 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 VASH1Q7L8A9 365 aaPredicted RBP13.79□□□□□ -0.2
CTSA-202ENST00000354880 ZNF454Q8N9F8 522 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 RAB2BQ8WUD1 216 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 UFD1Q92890 307 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 TRIB1Q96RU8 372 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
CTSA-202ENST00000354880 PRORYQ9H606 182 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 B3GAT2Q9NPZ5 323 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 GNG8Q9UK08 70 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
CTSA-202ENST00000354880 TMCC2O75069 709 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ZNF84P51523 738 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 RIPPLY2Q5TAB7 128 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PLEKHG7Q6ZR37 379 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 FGD2Q7Z6J4 655 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 CISD2Q8N5K1 135 aaKnown RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 TEX19Q8NA77 164 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ASB17Q8WXJ9 295 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 C12orf43Q96C57 262 aaKnown RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 ALKBH3Q96Q83 286 aaPredicted RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 DOK1Q99704 481 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 TTYH2Q9BSA4 534 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 CDADC1Q9BWV3 514 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 SLCO5A1Q9H2Y9 848 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 POLE4Q9NR33 117 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 UGT2A1Q9Y4X1 527 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PNMA8CA0A1B0GUJ8 204 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 OR6C65A6NJZ3 312 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PRR32B1ATL7 298 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PSMD9O00233 223 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 GABARAPO95166 117 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 NR4A1P22736 598 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 EGR3Q06889 387 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 EIF2B1Q14232 305 aaKnown RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 KCNMB1Q16558 191 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 C19orf48Q6RUI8 117 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 KCTD20Q7Z5Y7 419 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ATCAYQ86WG3 371 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 EGFL6Q8IUX8 553 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 ZFP41Q8N8Y5 198 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 PELI1Q96FA3 418 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 GMPPAQ96IJ6 420 aaPredicted RBP13.78□□□□□ -0.2
CTSA-202ENST00000354880 AMELYQ99218 206 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 LINC00470Q9BZP3 86 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 CRLF2Q9HC73 371 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 GLRX2Q9NS18 164 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 NDUFB11Q9NX14 153 aa13.78□□□□□ -0.2
CTSA-202ENST00000354880 FREM1Q5H8C1 2179 aa13.77□□□□□ -0.2
CTSA-202ENST00000354880 H3BMQ9 156 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 SULT1C4O75897 302 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 KRT8P05787 483 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 TACSTD2P09758 323 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 CELP19835 753 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 GADD45AP24522 165 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 EDNRAP25101 427 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 AGTR1P30556 359 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 GBX2P52951 348 aaPredicted RBP13.77□□□□□ -0.21
CTSA-202ENST00000354880 TAS2R43P59537 309 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 ACSF3Q4G176 576 aaPredicted RBP13.77□□□□□ -0.21
CTSA-202ENST00000354880 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 KCTD18Q6PI47 426 aaPredicted RBP13.77□□□□□ -0.21
CTSA-202ENST00000354880 DCXRQ7Z4W1 244 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 LINC00346Q8IVM7 164 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 CPT1CQ8TCG5 803 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 APH1AQ96BI3 265 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 ZNF837Q96EG3 531 aaPredicted RBP13.77□□□□□ -0.21
CTSA-202ENST00000354880 BCL7BQ9BQE9 202 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 ABHD6Q9BV23 337 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 NELFAQ9H3P2 528 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 EMC7Q9NPA0 242 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 ACOXLQ9NUZ1 547 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 CYB5R1Q9UHQ9 305 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
CTSA-202ENST00000354880 IKZF2Q9UKS7 526 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 POLR1DQ9Y2S0 133 aa13.77□□□□□ -0.21
CTSA-202ENST00000354880 NBEAQ8NFP9 2946 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 METTL15A6NJ78 407 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 E9PI62 339 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 AIREO43918 545 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 KRT33AO76009 404 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 OR8G3PP0DMU2 310 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 MSR1P21757 451 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 PSMA1P25786 263 aaKnown RBP13.76□□□□□ -0.21
CTSA-202ENST00000354880 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■■■■■ 34.4
CTSA-202ENST00000354880 SGCAQ16586 387 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 CTF1Q16619 201 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 CNPY1Q3B7I2 92 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 TIMM50Q3ZCQ8 353 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 ZNF585AQ6P3V2 769 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 LINGO2Q7L985 606 aa13.76□□□□□ -0.21
CTSA-202ENST00000354880 FAM220AQ7Z4H9 259 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms