RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MBD2Q9UBB5 411 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 KLK11Q9UBX7 282 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 MOKQ9UQ07 419 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 NTN1O95631 604 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 LGI1O95970 557 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CD2P06729 351 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 S100A7P31151 101 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SLC37A1P57057 533 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SURF2Q15527 256 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 NSDHLQ15738 373 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 RBM45Q8IUH3 476 aaKnown RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 OR10R2Q8NGX6 335 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF607Q96SK3 696 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 EPYCQ99645 322 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 B3GALT1Q9Y5Z6 326 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 A0A087X0M5 115 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CCDC187A0A096LP49 1063 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 A0A1B0GX30 115 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 AK1P00568 194 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CNR1P21554 472 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CPT2P23786 658 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 GPR143P51810 404 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 WNT4P56705 351 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CLDN6P56747 220 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ECH1Q13011 328 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 IKZF1Q13422 519 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 IFI44LQ53G44 452 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 HES3Q5TGS1 186 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 MLIPQ5VWP3 458 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 TMEM205Q6UW68 189 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 DHRS13Q6UX07 377 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 APOOLQ6UXV4 268 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 FRRS1Q6ZNA5 592 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 OLIG3Q7RTU3 272 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 OR11G2Q8NGC1 345 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 C16orf52Q8NHV5 167 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SLC25A36Q96CQ1 311 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SDF2Q99470 211 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ULBP3Q9BZM4 244 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF350Q9GZX5 532 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 SLITRK2Q9H156 845 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CNOT2Q9NZN8 540 aaKnown RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 NXT1Q9UKK6 140 aaKnown RBP9.14□□□□□ -0.95
SYNE1-203ENST00000354674 FBXL3Q9UKT7 428 aa9.14□□□□□ -0.95
SYNE1-203ENST00000354674 CACNA1CQ13936 2221 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 IDSB3KWA1 339 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 H3BSH0 61 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 LDLRAD4O15165 306 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 ACTL6AO96019 429 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 OR8U8P0C7N1 319 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 LIPCP11150 499 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 CSRP1P21291 193 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 SDHAP31040 664 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 EIF2S3P41091 472 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 SPCS3P61009 180 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 GAMTQ14353 236 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 OCLNQ16625 522 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 C3orf33Q6P1S2 294 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 ANKRD37Q7Z713 158 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 MORN4Q8NDC4 146 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 DEFB124Q8NES8 71 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 GPR32P1Q8NGA4 272 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 OR13C5Q8NGS8 318 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RGP1Q92546 391 aaPredicted RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 SEC22AQ96IW7 307 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 GAL3ST4Q96RP7 486 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RPS10P5Q9NQ39 176 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 PNO1Q9NRX1 252 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 THSD1Q9NS62 852 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 PRODH2Q9UF12 536 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RPL36Q9Y3U8 105 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 MEIS3P1A6NDR6 274 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 ALOX12BO75342 701 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 CT45A8P0DMV1 189 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 CT45A9P0DMV2 189 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 CPEP16870 476 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RPS4Y1P22090 263 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RNF212Q495C1 297 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 CT45A2Q5DJT8 189 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 NPSR1Q6W5P4 371 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 RNASE11Q8TAA1 199 aaKnown RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 SLC2A12Q8TD20 617 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 TCTEX1D2Q8WW35 142 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 HS6ST2Q96MM7 605 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 SLC46A1Q96NT5 459 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 LAT2Q9GZY6 243 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 NOX3Q9HBY0 568 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 PTTG3PQ9NZH4 202 aa9.13□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF629Q9UEG4 869 aaPredicted RBP9.13□□□□□ -0.95
SYNE1-203ENST00000354674 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.12□□□□□ -0.95
SYNE1-203ENST00000354674 ZC3H12DA2A288 527 aaKnown RBP9.12□□□□□ -0.95
SYNE1-203ENST00000354674 C9orf172C9J069 976 aa9.12□□□□□ -0.95
SYNE1-203ENST00000354674 ARG1P05089 322 aa9.12□□□□□ -0.95
SYNE1-203ENST00000354674 GDNFP39905 211 aa9.12□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
SYNE1-203ENST00000354674 OR8G1Q15617 311 aa9.12□□□□□ -0.95
SYNE1-203ENST00000354674 DCST2Q5T1A1 773 aa9.12□□□□□ -0.95
SYNE1-203ENST00000354674 ACSM5Q6NUN0 579 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms