RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CDK20Q8IZL9 346 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 LRRC18Q8N456 261 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 AMER3Q8N944 861 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 SLC25A36Q96CQ1 311 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 ARSGQ96EG1 525 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 YPEL4Q96NS1 127 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 CNN2Q99439 309 aaKnown RBP12.02□□□□□ -0.49
IFT88-202ENST00000351808 PRSS27Q9BQR3 290 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 TMED7Q9Y3B3 224 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 POMT1Q9Y6A1 747 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 SCN5AQ14524 2016 aa12.02□□□□□ -0.49
IFT88-202ENST00000351808 TRBV6-7A0A0A0MS04 114 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 CKMP06732 381 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 CTSHP09668 335 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 MYOGP15173 224 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 BSGP35613 385 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 RHEBQ15382 184 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 RANBP3LQ86VV4 465 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 SEH1LQ96EE3 360 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 EIF5A2Q9GZV4 153 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 TAF9BQ9HBM6 251 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNF223Q9UK11 482 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 TBC1D3BA6NDS4 549 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 RPL36A-HNRNPH2H7BZ11 118 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ADAP1O75689 374 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 CD1AP06126 327 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 SULT1A2P50226 295 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 RNASE10Q5GAN6 216 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 CHST9Q7L1S5 443 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNF615Q8N8J6 731 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 OR52E2Q8NGJ4 325 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 OR4K13Q8NH42 304 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 WFDC5Q8TCV5 224 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 Q96M85 177 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 DDA1Q9BW61 102 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 PARP11Q9NR21 331 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 SIGLEC7Q9Y286 467 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 PRG3Q9Y2Y8 225 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 MDC1Q14676 2089 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNF727A8MUV8 499 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 TMEM127O75204 238 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ERAL1O75616 437 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZIC2O95409 532 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 THBS1P07996 1170 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 NPSP0C0P6 89 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 TIMP2P16035 220 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 AKR1C4P17516 323 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 CSRP1P21291 193 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 TSFMP43897 325 aaKnown RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 GUK1Q16774 197 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNF343Q6P1L6 599 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 FOXRED2Q8IWF2 684 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 PRSS58Q8IYP2 241 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 OR4S1Q8NGB4 309 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 BSCL2Q96G97 398 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 PACRGQ96M98 296 aaPredicted RBP12.01□□□□□ -0.49
IFT88-202ENST00000351808 WDR92Q96MX6 357 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 MSRAQ9UJ68 235 aa12.01□□□□□ -0.49
IFT88-202ENST00000351808 ZNF736B4DX44 427 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 TOX3O15405 576 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 TBL1XO60907 577 aa12□□□□□ -0.49
IFT88-202ENST00000351808 TSPAN15O95858 294 aa12□□□□□ -0.49
IFT88-202ENST00000351808 APLNRP35414 380 aa12□□□□□ -0.49
IFT88-202ENST00000351808 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 Q499Y3 187 aa12□□□□□ -0.49
IFT88-202ENST00000351808 AKR1C8PQ5T2L2 129 aa12□□□□□ -0.49
IFT88-202ENST00000351808 HIST2H3PS2Q5TEC6 136 aa12□□□□□ -0.49
IFT88-202ENST00000351808 LANCL3Q6ZV70 420 aa12□□□□□ -0.49
IFT88-202ENST00000351808 OR7D2Q96RA2 312 aa12□□□□□ -0.49
IFT88-202ENST00000351808 PRODH2Q9UF12 536 aa12□□□□□ -0.49
IFT88-202ENST00000351808 WDR90Q96KV7 1748 aa12□□□□□ -0.49
IFT88-202ENST00000351808 ZNF724A8MTY0 619 aa12□□□□□ -0.49
IFT88-202ENST00000351808 PRR32B1ATL7 298 aa12□□□□□ -0.49
IFT88-202ENST00000351808 TBX19O60806 448 aa12□□□□□ -0.49
IFT88-202ENST00000351808 GPANK1O95872 356 aa12□□□□□ -0.49
IFT88-202ENST00000351808 CYB5AP00167 134 aa12□□□□□ -0.49
IFT88-202ENST00000351808 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 CXCL1P09341 107 aa12□□□□□ -0.49
IFT88-202ENST00000351808 OR8G3PP0DMU2 310 aa12□□□□□ -0.49
IFT88-202ENST00000351808 SPINT3P49223 89 aa12□□□□□ -0.49
IFT88-202ENST00000351808 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
IFT88-202ENST00000351808 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
IFT88-202ENST00000351808 ZNF627Q7L945 461 aa12□□□□□ -0.49
IFT88-202ENST00000351808 TMEM150AQ86TG1 271 aa12□□□□□ -0.49
IFT88-202ENST00000351808 GPR137CQ8N3F9 429 aa12□□□□□ -0.49
IFT88-202ENST00000351808 ADAD2Q8NCV1 583 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms