RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 LPAR2Q9HBW0 351 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 UFSP2Q9NUQ7 469 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 PGAP2Q9UHJ9 254 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 LOC285095A0A1B0GVY8 99 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 LINC00862A6NCI5 91 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 MANSC4A6NHS7 340 aaPredicted RBP5.41□□□□□ -1.54
RFC1-201ENST00000349703 SNURFLB1AK76 121 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 ZNF670-ZNF695F2Z2N8 137 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 PLSCR1O15162 318 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 KHDRBS3O75525 346 aaKnown RBP5.41□□□□□ -1.54
RFC1-201ENST00000349703 STBD1O95210 358 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 TRBC1P01850 177 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 FCGR3AP08637 254 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 DRD3P35462 400 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 TSPAN5P62079 268 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 C16orf54Q6UWD8 224 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.41□□□□□ -1.54
RFC1-201ENST00000349703 GLCCI1Q86VQ1 547 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 MMP21Q8N119 569 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 GIMAP1Q8WWP7 306 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 RAB1CQ92928 201 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 FOPNLQ96NB1 174 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 OR2A14Q96R47 310 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 PITX2Q99697 317 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 B4DXG7 233 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 MANBAO00462 879 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 PRAF2O60831 178 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 STK16O75716 305 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 VNN2O95498 520 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 SEMA4FO95754 770 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 CRHP06850 196 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 ARSBP15848 533 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 EVI2BP34910 448 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 RPS4XP62701 263 aaKnown RBP5.41□□□□□ -1.54
RFC1-201ENST00000349703 MLLT11Q13015 90 aaPredicted RBP5.41□□□□□ -1.54
RFC1-201ENST00000349703 NDUFAF6Q330K2 333 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 DUX4L9Q6RFH8 374 aaPredicted RBP5.41□□□□□ -1.54
RFC1-201ENST00000349703 CMTM1Q8IZ96 169 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 FIBINQ8TAL6 211 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 C15orf40Q8WUR7 153 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 EEF1AKMT1Q8WVE0 214 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 CMTM7Q96FZ5 175 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 SLC25A33Q9BSK2 321 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 GABARAPL3Q9BY60 117 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 REEP4Q9H6H4 257 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 BIN3Q9NQY0 253 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 PLSCR3Q9NRY6 295 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 WNT16Q9UBV4 365 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 SCP2D1Q9UJQ7 156 aa5.41□□□□□ -1.54
RFC1-201ENST00000349703 B4DEV8 164 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 GAPDHSO14556 408 aaPredicted RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 UBFD1O14562 309 aaKnown RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 SLC9A3R1O14745 358 aaPredicted RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 IFNA21P01568 189 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 IGHEP01854 428 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 BCKDHAP12694 445 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 STK19P49842 368 aaPredicted RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 FOXA1P55317 472 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CAP1Q01518 475 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 DEFA5Q01523 94 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 HIKESHIQ53FT3 197 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CLLU1Q5K131 121 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CDKL4Q5MAI5 379 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 ACSM5Q6NUN0 579 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 APOBEC3FQ8IUX4 373 aaKnown RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 PDZD9Q8IXQ8 264 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 ARL14Q8N4G2 192 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 TMEM156Q8N614 296 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 OR51L1Q8NGJ5 315 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 FAM110BQ8TC76 370 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 TOX2Q96NM4 488 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 GPR174Q9BXC1 333 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 SLC25A31Q9H0C2 315 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 PNRC2Q9NPJ4 139 aaKnown RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 SIRT7Q9NRC8 400 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 VAPAQ9P0L0 249 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 KIF25Q9UIL4 384 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 RCE1Q9Y256 329 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 ZNF749O43361 778 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 NARSO43776 548 aaKnown RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 SCN2BO60939 215 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 EPOP01588 193 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 RAF1P04049 648 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 HTR1AP08908 422 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 ACP2P11117 423 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 PIPP12273 146 aaPredicted RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 ZP3P21754 424 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CRISP1P54107 249 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CLDN8P56748 225 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 SYPL2Q5VXT5 272 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 FAM151BQ6UXP7 276 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 TAC4Q86UU9 113 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 SIDT2Q8NBJ9 832 aaKnown RBP5.4□□□□□ -1.54
RFC1-201ENST00000349703 B3GNT7Q8NFL0 401 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 LYPD6BQ8NI32 183 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 CCM2Q9BSQ5 444 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 FBXO44Q9H4M3 255 aa5.4□□□□□ -1.54
RFC1-201ENST00000349703 DNMT3BQ9UBC3 853 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms