RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 OR5T3Q8NGG3 340 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM106AQ96A25 262 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 CCDC74AQ96AQ1 378 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 OR2A5Q96R48 311 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 NRIP2Q9BQI9 281 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF350Q9GZX5 532 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 KIR3DX1Q9H7L2 352 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 RNF122Q9H9V4 155 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM27Q9HBJ8 222 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 CAPN10Q9HC96 672 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 MMP26Q9NRE1 261 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM100Q9NV29 134 aa16.88■□□□□ 0.29
SCARF1-202ENST00000348987 RCC2Q9P258 522 aaKnown RBP16.88■□□□□ 0.29
SCARF1-202ENST00000348987 LOC100509620A0A075B734 347 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 LRRC72A6NJI9 287 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 AGR2O95994 175 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 MELTFP08582 738 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 AKR1C3P42330 323 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ALKBH1Q13686 389 aaKnown RBP16.87■□□□□ 0.29
SCARF1-202ENST00000348987 EXOSC7Q15024 291 aaKnown RBP16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SHHQ15465 462 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ACER2Q5QJU3 275 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 LPCAT3Q6P1A2 487 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 CORO6Q6QEF8 472 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 RHOUQ7L0Q8 258 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 YAF2Q8IY57 180 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 NPEPL1Q8NDH3 523 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 FLVCR1-AS1Q8TAF5 88 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SLC25A21Q9BQT8 299 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ULBP3Q9BZM4 244 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 HRH4Q9H3N8 390 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SRMSQ9H3Y6 488 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 DAPP1Q9UN19 280 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM72A0PK05 275 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 APODP05090 189 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SLC35G6P0C7Q6 338 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 AVPR2P30518 371 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 TAS2R19P59542 299 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 DCST2Q5T1A1 773 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF684Q5T5D7 378 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM205Q6UW68 189 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 TMEM200AQ86VY9 491 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SFTPA2Q8IWL1 248 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF614Q8N883 585 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 OR10G6Q8NH81 332 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 STOML3Q8TAV4 291 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 GPX8Q8TED1 209 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 CLCC1Q96S66 551 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 SPSB2Q99619 263 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 NAA11Q9BSU3 229 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-202ENST00000348987 PAPOLGQ9BWT3 736 aaKnown RBP16.87■□□□□ 0.29
SCARF1-202ENST00000348987 ATG5Q9H1Y0 275 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 KLHDC2Q9Y2U9 406 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 COLEC10Q9Y6Z7 277 aa16.87■□□□□ 0.29
SCARF1-202ENST00000348987 A0A0B4J2A0 478 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 A0A1B0GWA3 101 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 C4orf47A7E2U8 309 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 RDH16O75452 317 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 CD74P04233 296 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ITGA5P08648 1049 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 POU2F2P09086 479 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 TPT1P13693 172 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 CPMP14384 443 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 PVRP15151 417 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 MUC1P15941 1255 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 AIMP2Q13155 320 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 C2orf76Q3KRA6 126 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 BAP18Q8IXM2 172 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 RASD2Q96D21 266 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 OR2M4Q96R27 311 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 SEMA6CQ9H3T2 930 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 SHPKQ9UHJ6 478 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 EEF1E1-BLOC1S5C9J1V9 151 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 K7EQS6 105 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF208O43345 1280 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 PLRG1O43660 514 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 UPK3AO75631 287 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 NDUFB2O95178 105 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 DCNP07585 359 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 APEHP13798 732 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ACTBP60709 375 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 RPS15AP62244 130 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ACTG1P63261 375 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 PJVKQ0ZLH3 352 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ELAVL1Q15717 326 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ZNF776Q68DI1 518 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 SLC29A4Q7RTT9 530 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 PARGQ86W56 976 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 NUBPLQ8TB37 319 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 ZMAT3Q9HA38 289 aaKnown RBP16.86■□□□□ 0.29
SCARF1-202ENST00000348987 GDE1Q9NZC3 331 aa16.86■□□□□ 0.29
SCARF1-202ENST00000348987 A0A0B4J2E0 115 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 TRBV5-5A0A0J9YX44 114 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 A0A1B0GX12 115 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 FGF17O60258 216 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
SCARF1-202ENST00000348987 F2RL1P55085 397 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 CXADRP78310 365 aa16.85■□□□□ 0.29
SCARF1-202ENST00000348987 SRSF5Q13243 272 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms