RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ELF4Q99607 663 aaPredicted RBP9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 SPSB2Q99619 263 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 PHB2Q99623 299 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 MICU1Q9BPX6 476 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC17A9Q9BYT1 436 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 HRH4Q9H3N8 390 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 C8orf33Q9H7E9 229 aaPredicted RBP9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 TM7SF3Q9NS93 570 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC2A8Q9NY64 477 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 PPP4R1LQ9P1A2 415 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 DEC1Q9P2X7 70 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 TBX21Q9UL17 535 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 CSAG2Q9Y5P2 127 aa9.35□□□□□ -0.91
CHRNA1-202ENST00000348749 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 DOK2O60496 412 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 UPK3AO75631 287 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 TACSTD2P09758 323 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 MPZP25189 248 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 MAS1LP35410 378 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 MAP3K8P41279 467 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 POU3F4P49335 361 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 DCST2Q5T1A1 773 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 MRPL2Q5T653 305 aaKnown RBP9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 FHL5Q5TD97 284 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 EEF1A1P5Q5VTE0 462 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 FAHD2BQ6P2I3 314 aaPredicted RBP9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 SLC39A5Q6ZMH5 540 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 ZDHHC22Q8N966 263 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 OR51D1Q8NGF3 324 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 OR51L1Q8NGJ5 315 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 SUSD6Q92537 303 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 DCUN1D4Q92564 292 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 FAHD2AQ96GK7 314 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 NRTNQ99748 197 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 SULT4A1Q9BR01 284 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 NMES1Q9C002 83 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 CHMP1AQ9HD42 196 aaPredicted RBP9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 ABT1Q9ULW3 272 aaKnown RBP9.34□□□□□ -0.91
CHRNA1-202ENST00000348749 A0A0B4J2E0 115 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 LOC100289279A0A1B0GTE1 492 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 A0A1B0GV90 55 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 A0A1B0GX12 115 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 METTL21EPA6NDL7 271 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 A6NLC8 198 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 PRR32B1ATL7 298 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 M0QYG6 137 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SMAD9O15198 467 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC31A2O15432 143 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 MAS1P04201 325 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 HOXB5P09067 269 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SMIM10L1P0DMW3 83 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 HOXA5P20719 270 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SOX2P48431 317 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 TAS2R60P59551 318 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 BTN3A2P78410 334 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 FIGNL1Q6PIW4 674 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 BTNL8Q6UX41 500 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 ETV3LQ6ZN32 361 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 FAM220AQ7Z4H9 259 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 LSRQ86X29 649 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 MRPL43Q8N983 215 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 NPEPL1Q8NDH3 523 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 OR4E2Q8NGC2 313 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 ZNRF4Q8WWF5 429 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC22A18Q96BI1 424 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SMIM10Q96HG1 83 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 KIRREL1Q96J84 757 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 CAPNS2Q96L46 248 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 Q96M85 177 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 RBM14Q96PK6 669 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 RNF126Q9BV68 326 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 GPR174Q9BXC1 333 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 NMNAT2Q9BZQ4 307 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 TRIM2Q9C040 744 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 WSB2Q9NYS7 404 aaPredicted RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 FRRS1LQ9P0K9 344 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 VSIG4Q9Y279 399 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 COLEC10Q9Y6Z7 277 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 TICRRQ7Z2Z1 1910 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 A0A087WV48 116 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 IGLON5A6NGN9 336 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 MBTPS2O43462 519 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 OIP5O43482 229 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 ALOX12BO75342 701 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 NDUFB2O95178 105 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 CYB5AP00167 134 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 DCNP07585 359 aaKnown RBP9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 COL4A2P08572 1712 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 SLC35G6P0C7Q6 338 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 RD3LP0DJH9 198 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 LYL1P12980 280 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 CPMP14384 443 aa9.33□□□□□ -0.92
CHRNA1-202ENST00000348749 AK4P27144 223 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms