RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SEC14L2O76054 403 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 TP53P04637 393 aaPredicted RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 IGFBP1P08833 259 aaPredicted RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 CBR1P16152 277 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 CTLA4P16410 223 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 ZNF83P51522 516 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 RAB1AP62820 205 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 ELF3P78545 371 aaPredicted RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 PPP2R2BQ00005 443 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 CDK5Q00535 292 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 PTGES3Q15185 160 aaKnown RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 RCN1Q15293 331 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 SNAPC1Q16533 368 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 C22orf34Q6ZV56 151 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 ALDH16A1Q8IZ83 802 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 CBR4Q8N4T8 237 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 SDR9C7Q8NEX9 313 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 PROKR2Q8NFJ6 384 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 OTULINQ96BN8 352 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 PLPPR2Q96GM1 343 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 C1QTNF6Q9BXI9 259 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 CLEC4MQ9H2X3 399 aaPredicted RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 SLC25A19Q9HC21 320 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 RPRD1BQ9NQG5 326 aaKnown RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 RASSF1Q9NS23 344 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 USE1Q9NZ43 259 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 B9D1Q9UPM9 204 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 SETXQ7Z333 2677 aaKnown RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
SNCA-202ENST00000345009 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 IQCMA0A1B0GVH7 501 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 OR6C68A6NDL8 312 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 VSTM5A8MXK1 200 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 PRR23D1E9PI22 279 aaPredicted RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 EI24O14681 340 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 TMCC2O75069 709 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 HLA-HP01893 362 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 HLA-DQA2P01906 255 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 CRYAAP02489 173 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 ALPLP05186 524 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 CST2P09228 141 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 PRR23D2P0DMB1 279 aaPredicted RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 ANPEPP15144 967 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 CDAP32320 146 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 PTDSS1P48651 473 aaKnown RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 SLC25A1P53007 311 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 LSM6P62312 80 aaKnown RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 PIGFQ07326 219 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 NPRL3Q12980 569 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 ZBTB46Q86UZ6 589 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 SKA3Q8IX90 412 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 OR6V1Q8N148 313 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 LRRC18Q8N456 261 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 IQCF1Q8N6M8 205 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 SLC37A3Q8NCC5 494 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 NPEPL1Q8NDH3 523 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 OR10H5Q8NGA6 315 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 OR4Q3Q8NH05 313 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 SH3GL3Q99963 347 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 CDADC1Q9BWV3 514 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 RACGAP1Q9H0H5 632 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 VCXQ9H320 206 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 C1orf198Q9H425 327 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 RIBC2Q9H4K1 309 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 POLE4Q9NR33 117 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 TVP23BQ9NYZ1 205 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 COA3Q9Y2R0 106 aaPredicted RBP10.33□□□□□ -0.76
SNCA-202ENST00000345009 POLR1DQ9Y2S0 133 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 RNF115Q9Y4L5 304 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 UGT2A1Q9Y4X1 527 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 TIMM10BQ9Y5J6 103 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 AKAP6Q13023 2319 aa10.33□□□□□ -0.76
SNCA-202ENST00000345009 FAM221AA4D161 298 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 DEFB108AA8MXU0 73 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 SURF4O15260 269 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 RRP9O43818 475 aaKnown RBP10.32□□□□□ -0.76
SNCA-202ENST00000345009 MITFO75030 526 aaPredicted RBP10.32□□□□□ -0.76
SNCA-202ENST00000345009 IGKV3-15P01624 115 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 HRGP04196 525 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 ZNF823P16415 610 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 CD40P25942 277 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 FMO3P31513 532 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 CDC42P60953 191 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 HSF2Q03933 536 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 BSPH1Q075Z2 132 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 CRMP1Q14194 572 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 TRIP10Q15642 601 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 ETFDHQ16134 617 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 NCMAPQ5T1S8 102 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 ACSM5Q6NUN0 579 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 SLC22A25Q6T423 547 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 FOXL2NBQ6ZUU3 175 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 MDP1Q86V88 176 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 CYB561A3Q8NBI2 242 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 OR1J2Q8NGS2 313 aa10.32□□□□□ -0.76
SNCA-202ENST00000345009 GABARAPL3Q9BY60 117 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms