RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CYTIPO60759 359 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HMGA1P17096 107 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SERPINF1P36955 418 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PLA1AQ53H76 456 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 LILRA3Q8N6C8 439 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR1J1Q8NGS3 322 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SLC46A1Q96NT5 459 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RNF32Q9H0A6 362 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TRAV36DV7A0A075B6V5 113 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SLC17A2O00624 439 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MT-ND4LP03901 98 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FOLR1P15328 257 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DVL1P1P54792 670 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HBG1P69891 147 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HBG2P69892 147 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 BTG2P78543 158 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF750Q32MQ0 723 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MAMSTRQ6ZN01 415 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FJX1Q86VR8 437 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ANGPTL5Q86XS5 388 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 LMNTD1Q8N9Z9 388 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CMSS1Q9BQ75 279 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TOLLIPQ9H0E2 274 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF223Q9UK11 482 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 GABRR1P24046 479 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 KIAA0141Q14154 515 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RFLNAQ6ZTI6 216 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR4C16Q8NGL9 310 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 SLC39A7Q92504 469 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RASD2Q96D21 266 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF160Q9HCG1 818 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 FZD3Q9NPG1 666 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 PCDHGA5Q9Y5G8 931 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 WDR90Q96KV7 1748 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TK1P04183 234 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 HRH1P35367 487 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MELKQ14680 651 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 IAH1Q2TAA2 248 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MMP21Q8N119 569 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 C10orf111Q8N326 155 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ABI3Q9P2A4 366 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TP53I11O14683 189 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 DFFBO76075 338 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CHRM4P08173 479 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RPL12P30050 165 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 AKR1C2P52895 323 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 TOMM34Q15785 309 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF239Q16600 458 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 RPUSD3Q6P087 351 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 EXD3Q8N9H8 876 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 CDCP1Q9H5V8 836 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 ADGRL4Q9HBW9 690 aa4.38□□□□□ -1.71
CSMD3-203ENST00000343508 LSM2Q9Y333 95 aaKnown RBP4.38□□□□□ -1.71
CSMD3-203ENST00000343508 OR6C6A6NF89 314 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 IRS1P35568 1242 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 B4GALNT1Q00973 533 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 SLC35D2Q76EJ3 337 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 OR1S2Q8NGQ3 325 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 GNPNAT1Q96EK6 184 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-203ENST00000343508 TCTN2Q96GX1 697 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 OR5B2Q96R09 309 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 C11orf49Q9H6J7 331 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 KLF15Q9UIH9 416 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 IGHG1P01857 330 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 NTSR1P30989 418 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 TTLL10Q6ZVT0 673 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 RHOUQ7L0Q8 258 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 NANPQ8TBE9 248 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 TAAR8Q969N4 342 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF286AQ9HBT8 521 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 RAB18Q9NP72 206 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 MTFP1Q9UDX5 166 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 DAPP1Q9UN19 280 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 GSTP1P09211 210 aaKnown RBP4.37□□□□□ -1.71
CSMD3-203ENST00000343508 SFTPDP35247 375 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 NDUFA6P56556 154 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 OR2B8PP59922 312 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 CD81P60033 236 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 YPEL5P62699 121 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 AKR1C1Q04828 323 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 CORO6Q6QEF8 472 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 RCBTB1Q8NDN9 531 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF764Q96H86 408 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-203ENST00000343508 FAM71F1Q96KD3 344 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-203ENST00000343508 ADOQ96SZ5 270 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 ARHGDIGQ99819 225 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 LIMS3P0CW19 117 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 LIMS4P0CW20 117 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 BCL6P41182 706 aa4.37□□□□□ -1.71
CSMD3-203ENST00000343508 CLDN2P57739 230 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms